Discovering and deciphering relationships across disparate data modalities

Author:

Vogelstein Joshua T12ORCID,Bridgeford Eric W1,Wang Qing1,Priebe Carey E1,Maggioni Mauro1,Shen Cencheng3ORCID

Affiliation:

1. Johns Hopkins University, Baltimore, United States

2. Child Mind Institute, New York, United States

3. University of Delaware, Delaware, United States

Abstract

Understanding the relationships between different properties of data, such as whether a genome or connectome has information about disease status, is increasingly important. While existing approaches can test whether two properties are related, they may require unfeasibly large sample sizes and often are not interpretable. Our approach, ‘Multiscale Graph Correlation’ (MGC), is a dependence test that juxtaposes disparate data science techniques, including k-nearest neighbors, kernel methods, and multiscale analysis. Other methods may require double or triple the number of samples to achieve the same statistical power as MGC in a benchmark suite including high-dimensional and nonlinear relationships, with dimensionality ranging from 1 to 1000. Moreover, MGC uniquely characterizes the latent geometry underlying the relationship, while maintaining computational efficiency. In real data, including brain imaging and cancer genetics, MGC detects the presence of a dependency and provides guidance for the next experiments to conduct.

Funder

Child Mind Institute

National Science Foundation

Defense Advanced Research Projects Agency

Office of Naval Research

Air Force Office of Scientific Research

Publisher

eLife Sciences Publications, Ltd

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

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