Fitness effects of altering gene expression noise in Saccharomyces cerevisiae

Author:

Duveau Fabien12ORCID,Hodgins-Davis Andrea1,Metzger Brian PH13,Yang Bing4,Tryban Stephen1,Walker Elizabeth A1,Lybrook Tricia1,Wittkopp Patricia J14ORCID

Affiliation:

1. Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, United States

2. Laboratoire Matière et Systèmes Complexes, CNRS UMR 7057, Université Paris Diderot, Paris, France

3. Department of Ecology and Evolution, University of Chicago, Chicago, United States

4. Department of Molecular, Cellular and Developmental Biology, University of Michigan, Ann Arbor, United States

Abstract

Gene expression noise is an evolvable property of biological systems that describes differences in expression among genetically identical cells in the same environment. Prior work has shown that expression noise is heritable and can be shaped by selection, but the impact of variation in expression noise on organismal fitness has proven difficult to measure. Here, we quantify the fitness effects of altering expression noise for the TDH3 gene in Saccharomyces cerevisiae. We show that increases in expression noise can be deleterious or beneficial depending on the difference between the average expression level of a genotype and the expression level maximizing fitness. We also show that a simple model relating single-cell expression levels to population growth produces patterns consistent with our empirical data. We use this model to explore a broad range of average expression levels and expression noise, providing additional insight into the fitness effects of variation in expression noise.

Funder

European Molecular Biology Organization

National Institutes of Health

National Science Foundation

Publisher

eLife Sciences Publications, Ltd

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

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