Tryptophan metabolism determines outcome in tuberculous meningitis: a targeted metabolomic analysis

Author:

Ardiansyah Edwin12ORCID,Avila-Pacheco Julian3,Nhat Le Thanh Hoang4ORCID,Dian Sofiati15ORCID,Vinh Dao Nguyen4,Hai Hoang Thanh4ORCID,Bullock Kevin3,Alisjahbana Bachti16,Netea Mihai G2ORCID,Estiasari Riwanti7,Tram Trinh Thi Bich4,Donovan Joseph489,Heemskerk Dorothee10,Chau Tran Thi Hong411,Bang Nguyen Duc12,Ganiem Ahmad Rizal15,Ruslami Rovina113,Koeken Valerie ACM214ORCID,Hamers Raph L15,Imran Darma7,Maharani Kartika7,Kumar Vinod2,Clish Clary B3,van Crevel Reinout2,Thwaites Guy48ORCID,van Laarhoven Arjan2ORCID,Thuong Nguyen Thuy Thuong48ORCID

Affiliation:

1. Research Center for Care and Control of Infectious Diseases, Universitas Padjadjaran

2. Department of Internal Medicine and Radboud Center of Infectious Diseases (RCI), Radboud University Medical Center

3. The Broad Institute of MIT and Harvard

4. Oxford University Clinical Research Unit

5. Department of Neurology, Hasan Sadikin Hospital, Faculty of Medicine, Universitas Padjadjaran

6. Department of Internal Medicine, Hasan Sadikin Hospital, Faculty of Medicine, Universitas Padjadjaran

7. Department of Neurology, Cipto Mangunkusumo Hospital, Faculty of Medicine Universitas Indonesia

8. Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford

9. London School of Hygiene and Tropical Medicine

10. Department of Medical Microbiology and Infection Prevention, Amsterdam University Medical Centre

11. Hospital for Tropical Diseases

12. Pham Ngoc Thach Hospital for Tuberculosis and Lung Disease

13. Department of Biomedical Science, Faculty of Medicine, Universitas Padjadjaran

14. Department of Computational Biology for Individualised Infection Medicine, Centre for Individualised Infection Medicine (CiiM) & TWINCORE, joint ventures between the Helmholtz-Centre for Infection Research (HZI) and the Hannover Medical School (MHH)

15. Oxford University Clinical Research Unit Indonesia, Faculty of Medicine Universitas Indonesia

Abstract

Background:Cellular metabolism is critical for the host immune function against pathogens, and metabolomic analysis may help understand the characteristic immunopathology of tuberculosis. We performed targeted metabolomic analyses in a large cohort of patients with tuberculous meningitis (TBM), the most severe manifestation of tuberculosis, focusing on tryptophan metabolism.Methods:We studied 1069 Indonesian and Vietnamese adults with TBM (26.6% HIV-positive), 54 non-infectious controls, 50 with bacterial meningitis, and 60 with cryptococcal meningitis. Tryptophan and downstream metabolites were measured in cerebrospinal fluid (CSF) and plasma using targeted liquid chromatography–mass spectrometry. Individual metabolite levels were associated with survival, clinical parameters, CSF bacterial load and 92 CSF inflammatory proteins.Results:CSF tryptophan was associated with 60-day mortality from TBM (hazard ratio [HR] = 1.16, 95% confidence interval [CI] = 1.10–1.24, for each doubling in CSF tryptophan) both in HIV-negative and -positive patients. CSF tryptophan concentrations did not correlate with CSF bacterial load nor CSF inflammation but were negatively correlated with CSF interferon-gamma concentrations. Unlike tryptophan, CSF concentrations of an intercorrelating cluster of downstream kynurenine metabolites did not predict mortality. These CSF kynurenine metabolites did however correlate with CSF inflammation and markers of blood–CSF leakage, and plasma kynurenine predicted death (HR 1.54, 95% CI = 1.22–1.93). These findings were mostly specific for TBM, although high CSF tryptophan was also associated with mortality from cryptococcal meningitis.Conclusions:TBM patients with a high baseline CSF tryptophan or high systemic (plasma) kynurenine are at increased risk of death. These findings may reveal new targets for host-directed therapy.Funding:This study was supported by National Institutes of Health (R01AI145781) and the Wellcome Trust (110179/Z/15/Z and 206724/Z/17/Z).

Funder

National Institutes of Health

Wellcome Trust

Direktorat Jenderal Pendidikan Tinggi

Ministry of Research, Technology and Higher Education of the Republic of Indonesia

United States Agency for International Development

Publisher

eLife Sciences Publications, Ltd

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

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