Reproducible diagnostic metabolites in plasma from typhoid fever patients in Asia and Africa

Author:

Näsström Elin1,Parry Christopher M23,Vu Thieu Nga Tran45,Maude Rapeephan R6,de Jong Hanna K78,Fukushima Masako2,Rzhepishevska Olena1,Marks Florian9,Panzner Ursula9,Im Justin9,Jeon Hyonjin9,Park Seeun9,Chaudhury Zabeen9,Ghose Aniruddha10,Samad Rasheda10,Van Tan Trinh4,Johansson Anders11,Dondorp Arjen M6,Thwaites Guy E412,Faiz Abul13,Antti Henrik1,Baker Stephen41214ORCID

Affiliation:

1. Department of Chemistry, Computational Life Science Cluster, Umeå University, Umeå, Sweden

2. Clinical Sciences, Liverpool School of Tropical Medicine, Liverpool, United Kingdom

3. School of Tropical Medicine and Global Health, Nagasaki University, Nagasaki, Japan

4. The Hospital for Tropical Diseases, Wellcome Trust Major Overseas Programme, Oxford University, Oxford, United Kingdom

5. Clinical Research Unit, Ho Chi Minh City, Vietnam

6. Mahidol-Oxford Tropical Medicine Research Unit (MORU), Faculty of Tropical Medicine, Mahidol University, Bangkok, Thailand

7. Department of Internal Medicine, Division of Infectious Diseases and Center for Infection and Immunity Amsterdam (CINIMA), University of Amsterdam, Amsterdam, the Netherlands

8. Center for Experimental Molecular Medicine (CEMM), Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands

9. The International Vaccine Institute, Seoul, South Korea

10. Chittagong Medical College Hospital, Chittagong, Bangladesh

11. Department of Clinical Microbiology, Umeå University, Umeå, Sweden

12. Centre for Tropical Medicine, Oxford University, Oxford, United Kingdom

13. Malaria Research Group and Dev Care Foundation, Dhaka, Bangladesh

14. Department of Medicine, The University of Cambridge, Cambridge, United Kingdom

Abstract

Salmonella Typhi is the causative agent of typhoid. Typhoid is diagnosed by blood culture, a method that lacks sensitivity, portability and speed. We have previously shown that specific metabolomic profiles can be detected in the blood of typhoid patients from Nepal (Näsström et al., 2014). Here, we performed mass spectrometry on plasma from Bangladeshi and Senegalese patients with culture confirmed typhoid fever, clinically suspected typhoid, and other febrile diseases including malaria. After applying supervised pattern recognition modelling, we could significantly distinguish metabolite profiles in plasma from the culture confirmed typhoid patients. After comparing the direction of change and degree of multivariate significance, we identified 24 metabolites that were consistently up- or down regulated in a further Bangladeshi/Senegalese validation cohort, and the Nepali cohort from our previous work. We have identified and validated a metabolite panel that can distinguish typhoid from other febrile diseases, providing a new approach for typhoid diagnostics.

Funder

Vetenskapsrådet

Swedish Research Council

Wellcome

Publisher

eLife Sciences Publications, Ltd

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

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