External validation of a mobile clinical decision support system for diarrhea etiology prediction in children: A multicenter study in Bangladesh and Mali

Author:

Garbern Stephanie Chow1ORCID,Nelson Eric J2,Nasrin Sabiha3,Keita Adama Mamby4,Brintz Ben J5ORCID,Gainey Monique6ORCID,Badji Henry4,Nasrin Dilruba7,Howard Joel8,Taniuchi Mami9,Platts-Mills James A9,Kotloff Karen L10,Haque Rashidul3,Levine Adam C1,Sow Samba O4,Alam Nur Haque3,Leung Daniel T11ORCID

Affiliation:

1. Department of Emergency Medicine, Alpert Medical School, Brown University

2. Department of Pediatrics, and Environmental and Global Health, Emerging Pathogens Institute, University of Florida

3. International Centre for Diarrhoeal Disease Research

4. Centre for Vaccine Development

5. Division of Epidemiology, University of Utah

6. Rhode Island Hospital

7. Center for Vaccine Development and Global Health, University of Maryland School of Medicine

8. Department of Pediatrics, University of Kentucky Medical School

9. Division of Infectious Diseases and International Health, University of Virginia

10. Department of Pediatrics, University of Maryland

11. Division of Infectious Diseases, University of Utah School of Medicine

Abstract

Background:Diarrheal illness is a leading cause of antibiotic use for children in low- and middle-income countries. Determination of diarrhea etiology at the point-of-care without reliance on laboratory testing has the potential to reduce inappropriate antibiotic use.Methods:This prospective observational study aimed to develop and externally validate the accuracy of a mobile software application (‘App’) for the prediction of viral-only etiology of acute diarrhea in children 0–59 months in Bangladesh and Mali. The App used a previously derived and internally validated model consisting of patient-specific (‘present patient’) clinical variables (age, blood in stool, vomiting, breastfeeding status, and mid-upper arm circumference) as well as location-specific viral diarrhea seasonality curves. The performance of additional models using the ‘present patient’ data combined with other external data sources including location-specific climate, data, recent patient data, and historical population-based prevalence were also evaluated in secondary analysis. Diarrhea etiology was determined with TaqMan Array Card using episode-specific attributable fraction (AFe) >0.5.Results:Of 302 children with acute diarrhea enrolled, 199 had etiologies above the AFe threshold. Viral-only pathogens were detected in 22% of patients in Mali and 63% in Bangladesh. Rotavirus was the most common pathogen detected (16% Mali; 60% Bangladesh). The present patient+ viral seasonality model had an AUC of 0.754 (0.665–0.843) for the sites combined, with calibration-in-the-large α = −0.393 (−0.455––0.331) and calibration slope β = 1.287 (1.207–1.367). By site, the present patient+ recent patient model performed best in Mali with an AUC of 0.783 (0.705–0.86); the present patient+ viral seasonality model performed best in Bangladesh with AUC 0.710 (0.595–0.825).Conclusions:The App accurately identified children with high likelihood of viral-only diarrhea etiology. Further studies to evaluate the App’s potential use in diagnostic and antimicrobial stewardship are underway.Funding:Funding for this study was provided through grants from the Bill and Melinda GatesFoundation (OPP1198876) and the National Institute of Allergy and Infectious Diseases (R01AI135114). Several investigators were also partially supported by a grant from the National Institute of Diabetes and Digestive and Kidney Diseases (R01DK116163). This investigation was also supported by the University of Utah Population Health Research (PHR) Foundation, with funding in part from the National Center for Advancing Translational Sciences of the National Institutes of Health under Award Number UL1TR002538. The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health. The funders had no role in the study design, data collection, data analysis, interpretation of data, or in the writing or decision to submit the manuscript for publication.

Funder

Bill and Melinda Gates Foundation

National Institute of Allergy and Infectious Diseases

National Institute of Diabetes and Digestive and Kidney Diseases

National Center for Advancing Translational Sciences

National Institutes of Health

Publisher

eLife Sciences Publications, Ltd

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

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