5′-Modifications improve potency and efficacy of DNA donors for precision genome editing

Author:

Ghanta Krishna S1ORCID,Chen Zexiang1ORCID,Mir Aamir1ORCID,Dokshin Gregoriy A1ORCID,Krishnamurthy Pranathi M1,Yoon Yeonsoo2ORCID,Gallant Judith2,Xu Ping2,Zhang Xiao-Ou3,Ozturk Ahmet Rasit1,Shin Masahiro4ORCID,Idrizi Feston4ORCID,Liu Pengpeng4,Gneid Hassan15ORCID,Edraki Alireza1,Lawson Nathan D467ORCID,Rivera-Pérez Jaime A26,Sontheimer Erik J167ORCID,Watts Jonathan K156ORCID,Mello Craig C178ORCID

Affiliation:

1. RNA Therapeutics Institute, University of Massachusetts Medical School, Worcester, United States

2. Department of Pediatrics, Division of Genes and Development, University of Massachusetts Medical School, Worcester, United States

3. Program in Bioinformatics and Integrative Biology, University of Massachusetts Medical School, Worcester, United States

4. Department of Molecular, Cell and Cancer Biology, University of Massachusetts Medical School, Worcester, United States

5. Department of Biochemistry and Molecular Biotechnology, University of Massachusetts Medical School, Worcester, United States

6. Li Weibo Institute for Rare Diseases Research, University of Massachusetts Medical School, Worcester, United States

7. Program in Molecular Medicine, University of Massachusetts Medical School, Worcester, United States

8. Howard Hughes Medical Institute, University of Massachusetts Medical School, Worcester, United States

Abstract

Nuclease-directed genome editing is a powerful tool for investigating physiology and has great promise as a therapeutic approach to correct mutations that cause disease. In its most precise form, genome editing can use cellular homology-directed repair (HDR) pathways to insert information from an exogenously supplied DNA-repair template (donor) directly into a targeted genomic location. Unfortunately, particularly for long insertions, toxicity and delivery considerations associated with repair template DNA can limit HDR efficacy. Here, we explore chemical modifications to both double-stranded and single-stranded DNA-repair templates. We describe 5′-terminal modifications, including in its simplest form the incorporation of triethylene glycol (TEG) moieties, that consistently increase the frequency of precision editing in the germlines of three animal models (Caenorhabditis elegans, zebrafish, mice) and in cultured human cells.

Funder

Howard Hughes Medical Institute

Office of Extramural Research, National Institutes of Health

University of Massachusetts Medical School

National Center for Advancing Translational Sciences

National Heart, Lung, and Blood Institute

NIH Office of the Director

Publisher

eLife Sciences Publications, Ltd

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

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