Functional cell types in the mouse superior colliculus

Author:

Li Ya-tang12ORCID,Meister Markus13ORCID

Affiliation:

1. Division of Biology and Biological Engineering, California Institute of Technology

2. Chinese Institute for Brain Research

3. Tianqiao and Chrissy Chen Institute for Neuroscience, California Institute of Technology

Abstract

The superior colliculus (SC) represents a major visual processing station in the mammalian brain that receives input from many types of retinal ganglion cells (RGCs). How many parallel channels exist in the SC, and what information does each encode? Here, we recorded from mouse superficial SC neurons under a battery of visual stimuli including those used for classification of RGCs. An unsupervised clustering algorithm identified 24 functional types based on their visual responses. They fall into two groups: one that responds similarly to RGCs and another with more diverse and specialized stimulus selectivity. The second group is dominant at greater depths, consistent with a vertical progression of signal processing in the SC. Cells of the same functional type tend to cluster near each other in anatomical space. Compared to the retina, the visual representation in the SC has lower dimensionality, consistent with a sifting process along the visual pathway.

Funder

National Institute of Neurological Disorders and Stroke

Simons Foundation

National Eye Institute

Helen Hay Whitney Foundation

Publisher

eLife Sciences Publications, Ltd

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

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