A gene-specific T2A-GAL4 library for Drosophila

Author:

Lee Pei-Tseng1ORCID,Zirin Jonathan2,Kanca Oguz1,Lin Wen-Wen1,Schulze Karen L13ORCID,Li-Kroeger David1,Tao Rong2,Devereaux Colby2,Hu Yanhui2,Chung Verena2,Fang Ying1,He Yuchun13,Pan Hongling13,Ge Ming1,Zuo Zhongyuan14,Housden Benjamin E2ORCID,Mohr Stephanie E25ORCID,Yamamoto Shinya1467ORCID,Levis Robert W8,Spradling Allan C8,Perrimon Norbert25ORCID,Bellen Hugo J13467ORCID

Affiliation:

1. Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, United States

2. Department of Genetics, Harvard Medical School, Boston, United States

3. Howard Hughes Medical Institute, Baylor College of Medicine, Houston, United States

4. Jan and Dan Duncan Neurological Research Institute, Texas Children’s Hospital, Houston, United States

5. Howard Hughes Medical Institute, Harvard Medical School, Boston, United States

6. Program in Developmental Biology, Baylor College of Medicine, Houston, United States

7. Department of Neuroscience, Baylor College of Medicine, Houston, United States

8. Department of Embryology, Howard Hughes Medical Institute, Carnegie Institution for Science, Baltimore, United States

Abstract

We generated a library of ~1000 Drosophila stocks in which we inserted a construct in the intron of genes allowing expression of GAL4 under control of endogenous promoters while arresting transcription with a polyadenylation signal 3’ of the GAL4. This allows numerous applications. First, ~90% of insertions in essential genes cause a severe loss-of-function phenotype, an effective way to mutagenize genes. Interestingly, 12/14 chromosomes engineered through CRISPR do not carry second-site lethal mutations. Second, 26/36 (70%) of lethal insertions tested are rescued with a single UAS-cDNA construct. Third, loss-of-function phenotypes associated with many GAL4 insertions can be reverted by excision with UAS-flippase. Fourth, GAL4 driven UAS-GFP/RFP reports tissue and cell-type specificity of gene expression with high sensitivity. We report the expression of hundreds of genes not previously reported. Finally, inserted cassettes can be replaced with GFP or any DNA. These stocks comprise a powerful resource for assessing gene function.

Funder

National Institutes of Health

National Institute of General Medical Sciences

Howard Hughes Medical Institute

Dana-Farber/Harvard Cancer Center

Huffington Foundation

Alzheimer's Association

Simons Foundation

Naman Family Fund for Basic Research

Caroline Wiess Law Fund

Eunice Kennedy Shriver National Institute of Child Health and Human Development

Robert A. and Renee E. Belfer Family Foundation

Publisher

eLife Sciences Publications, Ltd

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

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