KDM5A mutations identified in autism spectrum disorder using forward genetics

Author:

El Hayek Lauretta1ORCID,Tuncay Islam Oguz2,Nijem Nadine1,Russell Jamie3,Ludwig Sara3,Kaur Kiran1,Li Xiaohong3,Anderton Priscilla3,Tang Miao3,Gerard Amanda45,Heinze Anja6,Zacher Pia67,Alsaif Hessa S8,Rad Aboulfazl9ORCID,Hassanpour Kazem10,Abbaszadegan Mohammad Reza1112,Washington Camerun13,DuPont Barbara R13,Louie Raymond J13,Couse Madeline14,Faden Maha15,Rogers R Curtis13,Abou Jamra Rami6,Elias Ellen R16,Maroofian Reza17,Houlden Henry17,Lehman Anna14,Beutler Bruce3,Chahrour Maria H1231819ORCID,

Affiliation:

1. Eugene McDermott Center for Human Growth and Development, University of Texas Southwestern Medical Center, Dallas, United States

2. Department of Neuroscience, University of Texas Southwestern Medical Center, Dallas, United States

3. Center for the Genetics of Host Defense, University of Texas Southwestern Medical Center, Dallas, United States

4. Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, United States

5. Texas Children’s Hospital, Houston, United States

6. Institute of Human Genetics, University of Leipzig Medical Center, Leipzig, Germany

7. The Saxon Epilepsy Center Kleinwachau, Radeberg, Germany

8. Department of Genetics, King Faisal Specialist Hospital and Research Centre, Riyadh, Saudi Arabia

9. Cellular and Molecular Research Center, Sabzevar University of Medical Sciences, Sabzevar, Islamic Republic of Iran

10. Non-Communicable Diseases Research Center, Sabzevar University of Medical Sciences, Sabzevar, Islamic Republic of Iran

11. Pardis Clinical and Genetics Laboratory, Mashhad, Islamic Republic of Iran

12. Division of Human Genetics, Avicenna Research Institute, Mashhad University of Medical Sciences, Mashhad, Islamic Republic of Iran

13. Greenwood Genetic Center, Greenwood, United States

14. Department of Medical Genetics, University of British Columbia, British Columbia Children’s and Women’s Hospital Research Institute, Vancouver, Canada

15. Department of Genetics, King Saud Medical City, Riyadh, Saudi Arabia

16. Department of Pediatrics and Genetics, University of Colorado School of Medicine, Aurora, United States

17. Department of Neuromuscular Diseases, University College London, Queen Square Institute of Neurology, London, United Kingdom

18. Department of Psychiatry, University of Texas Southwestern Medical Center, Dallas, United States

19. Peter O’Donnell Jr. Brain Institute, University of Texas Southwestern Medical Center, Dallas, United States

Abstract

Autism spectrum disorder (ASD) is a constellation of neurodevelopmental disorders with high phenotypic and genetic heterogeneity, complicating the discovery of causative genes. Through a forward genetics approach selecting for defective vocalization in mice, we identified Kdm5a as a candidate ASD gene. To validate our discovery, we generated a Kdm5a knockout mouse model (Kdm5a-/-) and confirmed that inactivating Kdm5a disrupts vocalization. In addition, Kdm5a-/- mice displayed repetitive behaviors, sociability deficits, cognitive dysfunction, and abnormal dendritic morphogenesis. Loss of KDM5A also resulted in dysregulation of the hippocampal transcriptome. To determine if KDM5A mutations cause ASD in humans, we screened whole exome sequencing and microarray data from a clinical cohort. We identified pathogenic KDM5A variants in nine patients with ASD and lack of speech. Our findings illustrate the power and efficacy of forward genetics in identifying ASD genes and highlight the importance of KDM5A in normal brain development and function.

Funder

Welch Foundation

Walter and Lillian Cantor Foundation

University of Texas Southwestern Medical Center

Publisher

eLife Sciences Publications, Ltd

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

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