The metal cofactor zinc and interacting membranes modulate SOD1 conformation-aggregation landscape in an in vitro ALS model

Author:

Sannigrahi Achinta1ORCID,Chowdhury Sourav2,Das Bidisha13,Banerjee Amrita4,Halder Animesh5,Kumar Amaresh6,Saleem Mohammed6,Naganathan Athi N7ORCID,Karmakar Sanat5ORCID,Chattopadhyay Krishnananda13ORCID

Affiliation:

1. Structural Biology & Bio-Informatics Division, CSIR-Indian Institute of Chemical Biology, Kolkata, India

2. Chemistry and Chemical Biology, Harvard University, Cambridge, United States

3. Academy of Scientific and Innovative Research (AcSIR), CSIR- Human Resource development Centre Campus, Ghaziabad, India

4. Hiralal Mazumdar Memorial College for Women, Kolkata, India

5. Department of Physics, Jadavpur University, Kolkata, India

6. School of Biological Sciences, National Institute of Science Education and Research (NISER), Bhubaneswar, India

7. Department of Biotechnology, Bhupat & Jyoti Mehta School of Biosciences, Indian Institute of Technology Madras, Chennai, India

Abstract

Aggregation of Cu–Zn superoxide dismutase (SOD1) is implicated in the motor neuron disease, amyotrophic lateral sclerosis (ALS). Although more than 140 disease mutations of SOD1 are available, their stability or aggregation behaviors in membrane environment are not correlated with disease pathophysiology. Here, we use multiple mutational variants of SOD1 to show that the absence of Zn, and not Cu, significantly impacts membrane attachment of SOD1 through two loop regions facilitating aggregation driven by lipid-induced conformational changes. These loop regions influence both the primary (through Cu intake) and the gain of function (through aggregation) of SOD1 presumably through a shared conformational landscape. Combining experimental and theoretical frameworks using representative ALS disease mutants, we develop a ‘co-factor derived membrane association model’ wherein mutational stress closer to the Zn (but not to the Cu) pocket is responsible for membrane association-mediated toxic aggregation and survival time scale after ALS diagnosis.

Funder

University Grants Commission

Department of Biotechnology , Ministry of Science and Technology

Science and Engineering Research Board

CSIR

Publisher

eLife Sciences Publications, Ltd

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

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