Diagnostic potential for a serum miRNA neural network for detection of ovarian cancer

Author:

Elias Kevin M123ORCID,Fendler Wojciech245ORCID,Stawiski Konrad4ORCID,Fiascone Stephen J12,Vitonis Allison F267,Berkowitz Ross S12,Frendl Gyorgy238,Konstantinopoulos Panagiotis29,Crum Christopher P210,Kedzierska Magdalena11,Cramer Daniel W267,Chowdhury Dipanjan25ORCID

Affiliation:

1. Division of Gynecologic Oncology, Department of Obstetrics and Gynecology, Brigham and Women’s Hospital, Dana-Farber Cancer Institute, Boston, United States

2. Harvard Medical School, Boston, United States

3. Surgical ICU Translational Research Center, Brigham and Women’s Hospital, Boston, United States

4. Department of Biostatistics and Translational Medicine, Medical University of Lodz, Lodz, Poland

5. Department of Radiation Oncology, Dana-Farber Cancer Institute, Boston, United States

6. Obstetrics and Gynecology Epidemiology Center, Department of Obstetrics and Gynecology, Brigham and Women’s Hospital, Boston, United States

7. Department of Epidemiology, Harvard School of Public Health, Boston, United States

8. Department of Anesthesiology, Perioperative and Pain Medicine, Brigham and Women’s Hospital, Boston, United States

9. Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, United States

10. Division of Women’s and Perinatal Pathology, Department of Pathology, Brigham and Women’s Hospital, Boston, United States

11. Department of Clinical Oncology, Medical University of Lodz, Lodz, Poland

Abstract

Recent studies posit a role for non-coding RNAs in epithelial ovarian cancer (EOC). Combining small RNA sequencing from 179 human serum samples with a neural network analysis produced a miRNA algorithm for diagnosis of EOC (AUC 0.90; 95% CI: 0.81–0.99). The model significantly outperformed CA125 and functioned well regardless of patient age, histology, or stage. Among 454 patients with various diagnoses, the miRNA neural network had 100% specificity for ovarian cancer. After using 325 samples to adapt the neural network to qPCR measurements, the model was validated using 51 independent clinical samples, with a positive predictive value of 91.3% (95% CI: 73.3–97.6%) and negative predictive value of 78.6% (95% CI: 64.2–88.2%). Finally, biologic relevance was tested using in situ hybridization on 30 pre-metastatic lesions, showing intratumoral concentration of relevant miRNAs. These data suggest circulating miRNAs have potential to develop a non-invasive diagnostic test for ovarian cancer.

Funder

Robert and Deborah First Family Fund

National Institutes of Health

Ruth N White Research Fellowship in Gynecologic Oncology

Saltonstall Research Fund

Ian Potter Foundation

Sperling Family Fund Fellowship

Bach Underwood Fund

Honorable Tina Brozman Foundation

Fundacja na rzecz Nauki Polskiej

Smart Growth Operational Programme of the European Union

Uniwersytet Medyczny w Lodzi

U.S. Department of Defense

Publisher

eLife Sciences Publications, Ltd

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

Cited by 95 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3