Transition between fermentation and respiration determines history-dependent behavior in fluctuating carbon sources

Author:

Cerulus Bram12,Jariani Abbas12ORCID,Perez-Samper Gemma12,Vermeersch Lieselotte12ORCID,Pietsch Julian MJ3ORCID,Crane Matthew M34,New Aaron M12,Gallone Brigida1256,Roncoroni Miguel12,Dzialo Maria C12,Govers Sander K12ORCID,Hendrickx Jhana O12,Galle Eva12,Coomans Maarten12,Berden Pieter12,Verbandt Sara12,Swain Peter S3ORCID,Verstrepen Kevin J12ORCID

Affiliation:

1. VIB Laboratory for Systems Biology, VIB-KU Leuven Center for Microbiology, Leuven, Belgium

2. Departement Microbiële en Moleculaire Systemen (M2S), CMPG Laboratory of Genetics and Genomics, Leuven, Belgium

3. Centre for Synthetic and Systems Biology, School of Biological Sciences, University of Edinburgh, Edinburgh, United Kingdom

4. Department of Pathology, University of Washington, Washington, United States

5. Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium

6. VIB Center for Plant Systems Biology, Ghent, Belgium

Abstract

Cells constantly adapt to environmental fluctuations. These physiological changes require time and therefore cause a lag phase during which the cells do not function optimally. Interestingly, past exposure to an environmental condition can shorten the time needed to adapt when the condition re-occurs, even in daughter cells that never directly encountered the initial condition. Here, we use the molecular toolbox of Saccharomyces cerevisiae to systematically unravel the molecular mechanism underlying such history-dependent behavior in transitions between glucose and maltose. In contrast to previous hypotheses, the behavior does not depend on persistence of proteins involved in metabolism of a specific sugar. Instead, presence of glucose induces a gradual decline in the cells’ ability to activate respiration, which is needed to metabolize alternative carbon sources. These results reveal how trans-generational transitions in central carbon metabolism generate history-dependent behavior in yeast, and provide a mechanistic framework for similar phenomena in other cell types.

Funder

Fonds Wetenschappelijk Onderzoek

Vlaams Instituut voor Biotechnologie

European Research Council

AB-InBev-Baillet Latour Fund

Human Frontier Science Program

SULSA Postdoctoral Exchange Scheme

Publisher

eLife Sciences Publications, Ltd

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

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