Donated chemical probes for open science

Author:

Müller Susanne1ORCID,Ackloo Suzanne2,Arrowsmith Cheryl H3,Bauser Marcus4,Baryza Jeremy L5,Blagg Julian6,Böttcher Jark7,Bountra Chas8,Brown Peter J2,Bunnage Mark E5,Carter Adrian J9,Damerell David8,Dötsch Volker1011ORCID,Drewry David H12,Edwards Aled M2,Edwards James13,Elkins Jon M8ORCID,Fischer Christian14,Frye Stephen V15,Gollner Andreas16,Grimshaw Charles E17ORCID,IJzerman Adriaan18,Hanke Thomas1ORCID,Hartung Ingo V4,Hitchcock Steve19,Howe Trevor20,Hughes Terry V20,Laufer Stefan21,Li Volkhart MJ22,Liras Spiros23,Marsden Brian D824,Matsui Hisanori25,Mathias John23,O'Hagan Ronan C14,Owen Dafydd R23,Pande Vineet26,Rauh Daniel27,Rosenberg Saul H28,Roth Bryan L29,Schneider Natalie S1,Scholten Cora4,Singh Saikatendu Kumar19,Simeonov Anton30,Takizawa Masayuki31,Tse Chris28,Thompson Paul R32,Treiber Daniel K33,Viana Amélia YI9,Wells Carrow I12,Willson Timothy M12,Zuercher William J12,Knapp Stefan1,Mueller-Fahrnow Anke4

Affiliation:

1. Structural Genomics Consortium, Buchmann Institute for Molecular Life Sciences, Goethe University Frankfurt, Frankfurt am Main, Germany

2. Structural Genomics Consortium, University of Toronto, Toronto, Canada

3. Department of Medical Biophysics, University of Toronto, Toronto, Canada

4. Drug Discovery Pharmaceuticals, Bayer AG, Berlin, Germany

5. Vertex Pharmaceuticals, Boston, United States

6. Cancer Research UK Cancer Therapeutics Unit, The Institute of Cancer Research, London, United Kingdom

7. Discovery Research, Boehringer Ingelheim, Vienna, Austria

8. Structural Genomics Consortium, Nuffield Department of Medicine, University of Oxford, Oxford, United Kingdom

9. Discovery Research, Boehringer Ingelheim, Ingelheim am Rhein, Germany

10. Institute of Biophysical Chemistry, Goethe-University, Frankfurt am Main, Germany

11. Center for Biomolecular Magnetic Resonance, Goethe University, Frankfurt am Main, Germany

12. Structural Genomics Consortium, UNC Eshelman School of Pharmacy, University of North Carolina at Chapel Hill, Chapel Hill, United States

13. Janssen Pharmaceutical Research and Development LLC, Spring House, United States

14. Merck & Co., Inc., Boston, United States

15. Center for Integrative Chemical Biology and Drug Discovery, Division of Chemical Biology and Medicinal Chemistry, UNC Eshelman School of Pharmacy, University of North Carolina at Chapel Hill, Chapel Hill, United States

16. Discovery Research, Boehringer Ingelheim, Biberach an der Riss, Germany

17. Ched Grimshaw Consulting, LLC, Poway, United States

18. Division of Medicinal Chemistry, Leiden University, Leiden, Netherlands

19. Takeda California Inc., San Diego, United States

20. J&J Innovation Centre, London, United Kingdom

21. Department of Pharmaceutical Chemistry, Eberhard Karls Universität Tübingen, Tübingen, Germany

22. Drug Discovery Pharmaceuticals, Bayer AG, Wuppertal, Germany

23. Worldwide Medicinal Chemistry, Pfizer, Cambridge, United States

24. Kennedy Institute of Rheumatology, University of Oxford, Oxford, United Kingdom

25. Takeda Pharmaceutical Company Ltd, Fujisawa, Japan

26. Discovery Sciences, Janssen-Pharmaceutical Companies of Johnson & Johnson, Beerse, Belgium

27. Fakultät für Chemie und Chemische Biologie, Technische Universität Dortmund, Dortmund, Germany

28. AbbVie, North Chicago, United States

29. The National Institute of Mental Health Psychoactive Active Drug Screening Program, University of North Carolina Chapel Hill School of Medicine, Chapel Hill, United States

30. National Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, United States

31. Takeda Pharmaceutical Company Ltd., Fujisawa, Japan

32. Department of Biochemistry and Pharmacology, University of Massachusetts Medical School, Worcester, United States

33. Eurofins DiscoverX, Sane Diego, United States

Abstract

Potent, selective and broadly characterized small molecule modulators of protein function (chemical probes) are powerful research reagents. The pharmaceutical industry has generated many high-quality chemical probes and several of these have been made available to academia. However, probe-associated data and control compounds, such as inactive structurally related molecules and their associated data, are generally not accessible. The lack of data and guidance makes it difficult for researchers to decide which chemical tools to choose. Several pharmaceutical companies (AbbVie, Bayer, Boehringer Ingelheim, Janssen, MSD, Pfizer, and Takeda) have therefore entered into a pre-competitive collaboration to make available a large number of innovative high-quality probes, including all probe-associated data, control compounds and recommendations on use (https://openscienceprobes.sgc-frankfurt.de/). Here we describe the chemical tools and target-related knowledge that have been made available, and encourage others to join the project.

Publisher

eLife Sciences Publications, Ltd

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

Reference23 articles.

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