Ultra-fast and High-quality Mapping of Error-prone Long Reads
Author:
Affiliation:
1. The University of Tokyo,Graduate School of Frontier Sciences,Department of Computational Biology and Medical Sciences,Chiba,Japan
Publisher
IEEE
Link
http://xplorestaging.ieee.org/ielx7/10385250/10385251/10385755.pdf?arnumber=10385755
Reference13 articles.
1. Efficient mapping of accurate long reads in minimizer space with mapquik
2. Minimizer-space de Bruijn graphs: Whole-genome assembly of long reads in minutes on a personal computer
3. Minimap2: pairwise alignment for nucleotide sequences
4. Mapping-friendly sequence reductions: Going beyond homopolymer compression
5. Masked Minimizers: Unifying sequence sketching methods;Hoang;bioRxiv,2022
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