Current Progress and Challenges in Large-scale 3D Mitochondria Instance Segmentation

Author:

Franco-Barranco Daniel1ORCID,Lin Zudi2ORCID,Jang Won-Dong2,Wang Xueying3ORCID,Shen Qijia4,Yin Wenjie3,Fan Yutian3,Li Mingxing5,Chen Chang5ORCID,Xiong Zhiwei5ORCID,Xin Rui6,Liu Hao6,Chen Huai6ORCID,Li Zhili7,Zhao Jie7ORCID,Chen Xuejin7ORCID,Pape Constantin8,Conrad Ryan9,Nightingale Luke10,De Folter Joost10ORCID,Jones Martin L.10,Liu Yanling11,Ziaei Dorsa11,Huschauer Stephan,Arganda-Carreras Ignacio1ORCID,Pfister Hanspeter2ORCID,Wei Donglai12

Affiliation:

1. Department of Computer Science and Artificial Intelligence, University of the Basque Country, Donostia-San Sebastian, Spain

2. John A. Paulson School of Engineering and Applied Sciences (SEAS), Harvard University, Allston, MA, USA

3. Department of Molecular and Cellular Biology, Harvard University, Cambridge, MA, USA

4. Nuffield Department of Clinical Neurosciences, Wellcome Centre for Integrative Neuroimaging, FMRIB, University of Oxford, Oxford, United Kingdom

5. Dept. Electronic Engineering and Information Science (EEIS), University of Science and Technology of China, Anhui, China

6. Department of Automation, Institute of Image Processing and Pattern Recognition, Shanghai Jiao Tong University, Shanghai, China

7. National Engineering Laboratory for Brain-inspired Intelligence Technology and Application, University of Science and Technology of China, Anhui, China

8. Georg-August University Goettingen, Germany

9. Center for Cancer Research, National Cancer Institute, Center for Molecular Microscopy, National Institutes of Health, Bethesda, USA

10. Francis Crick Institute, London, United Kingdom

11. Advanced Biomedical Computational Science group, Frederick National Laboratory for Cancer Research, Frederick, MD, USA

12. Computer Science Department, Boston College, Chestnut Hill, MA, USA

Funder

Center for Hierarchical Manufacturing, National Science Foundation

Wellcome Trust

Francis Crick Institute

Euskal Herriko Unibertsitatea

UK Medical Research Council

NIH

Frederick National Laboratory for Cancer Research

Ministerio de Ciencia, Innovaci?n y Universidades

Publisher

Institute of Electrical and Electronics Engineers (IEEE)

Subject

Electrical and Electronic Engineering,Computer Science Applications,Radiological and Ultrasound Technology,Software

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