Needleman-Wunsch Attention: A Framework for Enhancing DNA Sequence Embedding

Author:

Lee Kyelim1ORCID,No Albert2ORCID

Affiliation:

1. Department of Electronic and Electrical Engineering, Hongik University, Seoul, South Korea

2. Department of Artificial Intelligence, Yonsei University, Seoul, South Korea

Funder

National Research Foundation of Korea

Korean Government [Ministry of Science, ICT and Future Planning (MSIP)]

Publisher

Institute of Electrical and Electronics Engineers (IEEE)

Reference47 articles.

1. A technique for computer detection and correction of spelling errors

2. Binary codes capable of correcting deletions, insertions, and reversals;Levenshtein;Sov. Phys. Doklady,1966

3. Deep squared Euclidean approximation to the Levenshtein distance for dna storage;Guo

4. Cooperative sequence clustering and decoding for DNA storage system with fountain codes

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