Free Energy Analysis of Protein–DNA Binding: The EcoRI Endonuclease–DNA Complex-Reference-Cited by-同舟云学术

Free Energy Analysis of Protein–DNA Binding: The EcoRI Endonuclease–DNA Complex

Published:1999-05 Issue:1 Volume:151 Page:333-357
ISSN:0021-9991
Container-title:Journal of Computational Physics
language:en
Short-container-title:Journal of Computational Physics

Author:

Jayaram B,McConnell K.J,Dixit Surjit B,Beveridge D.L

Publisher

Elsevier BV

Subject

Computer Science Applications,Physics and Astronomy (miscellaneous),Applied Mathematics,Computational Mathematics,Modeling and Simulation,Numerical Analysis

Reference84 articles.

1. Free energy via molecular simulation applications to chemical and biomolecular systems;Beveridge;Ann. Rev. Biophys. Biophys. Chem.,1989

2. Free energy calculations: A breakthrough for modeling organic chemistry in solution;Jorgensen;Acc. Chem. Res.,1989

3. Free energy from simulations;McCammon;Curr. Opinion Struct. Biol.,1991

4. Free energy calculations: Applications to chemical and biochemical phenomena;Kollman;Chem. Rev.,1993

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