ROBUST SCALABLE VISUALIZED CLUSTERING IN VECTOR AND NON VECTOR SEMI-METRIC SPACES

Author:

FOX GEOFFREY1

Affiliation:

1. School of Informatics and Computing, Indiana University, Bloomington Indiana 47408, USA

Abstract

We describe an approach to data analytics on large systems using a suite of robust parallel algorithms running on both clouds and HPC systems. We apply this to cases where the data is defined in a vector space and when only pairwise distances between points are defined. We introduce improvements to known algorithms for functionality, features and performance but review state of the art as this is not broadly familiar. Visualization is valuable for steering complex analytics and we discuss it for both the non vector semi-metric case and for clustering high dimension vector spaces. We exploit deterministic annealing which is heuristic but has clear general principles that can give reasonably fast robust algorithms. We apply methods to several life sciences applications.

Publisher

World Scientific Pub Co Pte Lt

Subject

Hardware and Architecture,Theoretical Computer Science,Software

Cited by 4 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

1. Linking clinotypes to phenotypes and genotypes from laboratory test results in comprehensive physical exams;BMC Medical Informatics and Decision Making;2021-02

2. Harp: Collective Communication on Hadoop;2015 IEEE International Conference on Cloud Engineering;2015-03

3. Towards a Comprehensive Set of Big Data Benchmarks;ADV PARALLEL COMPUT;2015

4. Integration of Clustering and Multidimensional Scaling to Determine Phylogenetic Trees as Spherical Phylograms Visualized in 3 Dimensions;2014 14th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing;2014-05

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