INTERACTIVE REGISTRATION OF INTRACELLULAR VOLUMES WITH RADIAL BASIS FUNCTIONS

Author:

YOSHIZAWA SHIN1,TAKEMOTO SATOKO1,TAKAHASHI MIWA2,MUROI MAKOTO3,KAZAMI SAYAKA3,MIYOSHI HIROMI4,YOKOTA HIDEO1

Affiliation:

1. Bio-Research Infrastructure Construction Team, VCAD System Research Program, RIKEN 2-1, Hirosawa, Wako, Saitama 351-0198, Japan

2. Department of Biochemistry, University of Geneva, 30 quai Ernest-Ansermet, CH-1211 Geneva, Switzerland

3. Antibiotics Laboratory, Advanced Science Institute, RIKEN 2-1, Hirosawa, Wako, Saitama 351-0198, Japan

4. Computational Cell Biomechanics Team, VCAD System Research Program, RIKEN 2-1, Hirosawa, Wako, Saitama 351-0198, Japan

Abstract

We propose a novel approach to 3D image registration of intracellular volumes. The approach extends a standard image registration framework to the curved cell geometry. An intracellular volume is mapped onto another intracellular domain by using two pairs of point set surfaces approximating their nuclear and plasma membranes. The mapping function consists of the affine transformation, tetrahedral barycentric interpolation, and least-squares formulation of radial basis functions for extracted cell geometry features. An interactive volume registration system is also developed based on our approach. We demonstrate that our approach is capable of creating cell models containing multiple organelles from observed data of living cells.

Publisher

World Scientific Pub Co Pte Lt

Subject

Computer Science Applications,Theoretical Computer Science,Software

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