IT IS NL-COMPLETE TO DECIDE WHETHER A HAIRPIN COMPLETION OF REGULAR LANGUAGES IS REGULAR

Abstract

The hairpin completion is an operation on formal languages which is inspired by the hairpin formation in biochemistry. Hairpin formations occur naturally within DNA-computing. It has been known that the hairpin completion of a regular language is linear context-free, but not regular, in general. However, for some time it is was open whether the regularity of the hairpin completion of a regular language is decidable. In 2009 this decidability problem has been solved positively in [5] by providing a polynomial time algorithm. In this paper we improve the complexity bound by showing that the decision problem is actually NL-complete. This complexity bound holds for both, the one-sided and the two-sided hairpin completions.