Application of Vector Space Techniques to DNA-Reference-Cited by-同舟云学术

Application of Vector Space Techniques to DNA

Published:1998-09 Issue:03 Volume:06 Page:205-210
ISSN:0218-348X
Container-title:Fractals
language:en
Short-container-title:Fractals

Author:

Bíró T.¹,Czirók A.¹,Vicsek T.¹,Major Á.²

Affiliation:

1. Department of Biological Physics, Eötvös University, Budapest, Puskin u 5-7, 1088, Hungary

2. Department of Genetics, Eötvös University, Budapest, Múzeum krt 4/a, 1088, Hungary

Abstract

We propose the application of a recent vector space technique for the analysis of DNA sequences. In this approach the similarity of two series of symbols is measured by the dot products of vectors corresponding to the given sequences. In this paper we demonstrate that this measure, depending on the short-range properties of the sequences, may be used for identifying different elements of the genome.

Publisher

World Scientific Pub Co Pte Lt

Subject

Applied Mathematics,Geometry and Topology,Modelling and Simulation

Link

https://www.worldscientific.com/doi/pdf/10.1142/S0218348X98000250

Reference13 articles.

1. Long-range correlations in nucleotide sequences

2. Systematic analysis of coding and noncoding DNA sequences using methods of statistical linguistics

3. Correlations in binary sequences and a generalized Zipf analysis

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