Phylogenomics reveals multiple introductions and early spread of SARS-CoV-2 into Peru-Reference-Cited by-同舟云学术

Phylogenomics reveals multiple introductions and early spread of SARS-CoV-2 into Peru

Published:2020-09-14 Issue: Volume: Page:
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Author:

Juscamayta-López Eduardo^ORCID,Tarazona David^ORCID,Valdivia Faviola^ORCID,Rojas Nancy^ORCID,Carhuaricra Dennis^ORCID,Maturrano Lenin^ORCID,Gavilán Ronnie^ORCID

Abstract

ABSTRACTPeru has become one of the countries with the highest mortality rate from the current severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic. To investigate early transmission event and genomic diversity of SARS-CoV-2 isolates circulating in Peru, we analyzed a total of 3472 SARS-CoV-2 genomes, from which 149 ones were from Peru. Phylogenomic analysis revealed multiple and independent introductions of the virus mainly from Europe and Asia. In addition, we found evidence for community-driven transmission of SARS-CoV-2 as suggested by clusters of related viruses found in patients living in different Peru regions.

Publisher

Cold Spring Harbor Laboratory

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