Minimized Sample Consumption for Time-Resolved Serial Crystallography Applied to the Redox Cycle of Human NQO1

Author:

Doppler Diandra,Grieco Alice,Koh Domin,Manna Abhik,Ansari Adil,Alvarez Roberto,Karpos Konstantinos,Le Hung,Sonker Mukul,Ketawala Gihan K.,Mahmud Samira,Moraleda Isabel Quereda,Pey Angel L.,Letrun Romain,Dörner Katerina,Koliyadu Jayanath C. P.,de Wijn Raphael,Bielecki Johan,Han HuijongORCID,Kim Chan,Koua Faisal H. M.,Round Adam,Sarma Abhisakh,Sato Tokushi,Schmidt Christina,Vakili Mohammad,Zabelskii Dmitrii,Bean Richard,Mancuso Adrian P.,Schulz Joachim,Fromme Raimund,Medina Milagros,Grant Thomas D.ORCID,Fromme Petra,Kirian Richard A.,Botha Sabine,Martin-Garcia Jose Manuel,Ros AlexandraORCID

Abstract

AbstractSample consumption for serial femtosecond crystallography (SFX) with X-ray free electron lasers (XFELs) remains a major limitation preventing broader use of this powerful technology in macromolecular crystallography. This drawback is exacerbated in the case of time-resolved (TR)-SFX experiments, where the amount of sample required per reaction time point is multiplied by the number of time points investigated. Thus, in order to reduce the limitation of sample consumption, here we demonstrate the implementation of segmented droplet generation in conjunction with a mix-and-inject approach for TR studies on NAD(P)H:quinone oxidoreductase 1 (NQO1). We present the design and application of mix-and-inject segmented droplet injectors for the Single Particles, Clusters, and Biomolecules & Serial Femtosecond Crystallography (SPB/SFX) instrument at the European XFEL (EuXFEL) with a synchronized droplet injection approach that allows liquid phase protein crystal injection. We carried out TR-crystallography experiments with this approach for a 305 ms and a 1190 ms time point in the reaction of NQO1 with its coenzyme NADH. With this successful TR-SFX approach, up to 97% of the sample has been conserved compared to continuous crystal suspension injection with a gas dynamic virtual nozzle. Furthermore, the obtained structural information for the reaction of NQO1 with NADH is an important part of the future elucidation of the reaction mechanism of this crucial therapeutic enzyme.

Publisher

Cold Spring Harbor Laboratory

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