Author:
Gehring Jase,Park Jong Hwee,Chen Sisi,Thomson Matthew,Pachter Lior
Abstract
AbstractWe describe a universal sample multiplexing method for single-cell RNA-seq in which cells are chemically labeled with identifying DNA oligonucleotides. Analysis of a 96-plex perturbation experiment revealed changes in cell population structure and transcriptional states that cannot be discerned from bulk measurements, establishing a cost effective means to survey cell populations from large experiments and clinical samples with the depth and resolution of single-cell RNA-seq.
Publisher
Cold Spring Harbor Laboratory
Reference21 articles.
1. Massively Parallel Digital Transcriptional Profiling of Single Cells;Nature Communications,2017
2. Exponential Scaling of Single-Cell RNA-Seq in the Past Decade;Nature Protocols,2018
3. “Datasets - Single Cell Gene Expression - Official 10x Genomics Support.” Accessed April 25, 2018. https://support.10xgenomics.com/single-cell-gene-expression/datasets.
4. FUNDAMENTALS OF PLANARIAN REGENERATION
5. Stoeckius, Marlon , Shiwei Zheng , Brian Houck-Loomis , Stephanie Hao , Bertrand Yeung , Peter Smibert , and Rahul Satija . “Cell ‘Hashing’ with Barcoded Antibodies Enables Multiplexing and Doublet Detection for Single Cell Genomics.” BioRxiv, December 21, 2017, 237693. https://doi.org/10.1101/237693.
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