Previously uncharacterized rectangular bacteria in the dolphin mouth

Abstract

SUMMARYMuch remains to be explored regarding the diversity of host-associated microbes. Here, we report the discovery of microbial structures in the mouths of bottlenose dolphins that we refer to as rectangular cell-like units (RCUs). DNA staining revealed multiple paired bands that suggested cells in the act of dividing along the longitudinal axis. Deep sequencing of samples enriched in RCUs through micromanipulation indicated that the RCUs are bacterial and distinct from Simonsiella, a genus with somewhat similar morphology and division patterning found in oral cavities of animals. Cryogenic transmission electron microscopy and tomography showed that RCUs are composed of parallel membrane-bound segments, likely individual cells, encapsulated by an S-layer-like periodic surface covering. RCUs displayed pilus-like appendages protruding as bundles of multiple threads that extend parallel to each other, and splay out at the tips and/or intertwine, in stark contrast to all known types of bacterial pili that consist of single, hair-like structures. These observations highlight the diversity of novel microbial forms and lifestyles that await discovery and characterization using tools complementary to genomics such as microscopy.