The Health for Life in Singapore (HELIOS) Study: delivering Precision Medicine research for Asian populations

Author:

Wang Xiaoyan,Mina TheresiaORCID,Sadhu NilanjanaORCID,Jain Pritesh R,Ng Hong Kiat,Low Dorrain YanwenORCID,Tay Darwin,Tong Terry Yoke Yin,Choo Wee-Lin,Kerk Swat Kim,Low Guo Liang, ,Lam Benjamin Chih Chiang,Dalan Rinkoo,Wanseicheong Gervais,Yew Yik Weng,Leow Ee-J,Brage Soren,Michelotti Gregory A,Wong Kari E,Sheridan Patricia A,Low Pin Yan,Yeo Zhen Xuan,Bertin Nicolas,Bellis Claire,Hebrard Maxime,Goy Pierre-Alexis,Tsilidis Kostas,Sanikini Harinakshi,Guan Xue Li,Lim Tock Han,Lee Lionel,Best James D,Tan Patrick,Elliott Paul,Lee Eng Sing,Lee Jimmy,Ngeow Joanne,Riboli Elio,Lam MaxORCID,Loh Marie,Chambers John C

Abstract

AbstractAsian people are under-represented in population-based, clinical, and genomic research.1,2To address this gap, we have initiated the HELIOS longitudinal cohort study, comprising comprehensive behavioural, phenotypic, and genomic measurements from 10,004 Asian men and women of Chinese, Indian or Malay background. Phenotyping has been carried out using validated approaches, that are internationally interoperable. Health record linkage enriches both baseline phenotyping and evaluation of prospective outcomes. The integrated multi-omics data include whole-genome and RNA sequencing, quantification of DNA methylation, and metabolomic profiling. Our data reveal extensive lifestyle, physiological, genomic, and molecular diversity between the distinct Asian ethnic groups, and the biological interconnectivity between functional layers. This includes characterisation of divergent patterns of genome regulation between Asian individuals, that correlate with differences in educational attainment, dietary quality, and adiposity, and which overlap transcription factors and DNA methylation sites linked to the development of diabetes and other chronic diseases. Our unique HELIOS Asian Precision Medicine cohort study represents a state-of-the art platform to enable biomedical researchers to understand the aetiology and pathogenesis of diverse disease outcomes in Asia, and to generate insights that have the potential to improve health outcomes for Asian populations globally.

Publisher

Cold Spring Harbor Laboratory

Reference62 articles.

1. Genomics is failing on diversity

2. The Singapore National Precision Medicine Strategy;Nat Genet,2023

3. World Health Organization. Noncommunicable diseases fact sheets. Available from https://www.who.int/news-room/fact-sheets/detail/noncommunicable-diseases (2023).

4. World Health Organization. Noncommunicable diseases in the South East Asia. World Health Organization. Available from https://www.who.int/southeastasia/health-topics/noncommunicable-diseases (2021).

5. International Diabetes Federation. IDF Diabetes Atlas, 10th Edition. Available from https://diabetesatlas.org/atlas/tenth-edition/?dlmodal=active&dlsrc=https%3A%2F%2Fdiabetesatlas.org%2Fidfawp%2Fresource-files%2F2021%2F07%2FIDF_Atlas_10th_Edition_2021.pdf (2021).

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