1. Abadi, M. , Agarwal, A. , Barham, P. , Brevdo, E. , Chen, Z. , Citro, C. , Corrado, G.S. , Davis, A. , Dean, J. , Devin, M. , et al. (2016). TensorFlow: Large-Scale Machine Learning on Heterogeneous Distributed Systems. ArXiv.
2. SCENIC: single-cell regulatory network inference and clustering
3. Lymphoid Development from Stem Cells and the Common Lymphocyte Progenitors
4. Becht, E. , McInnes, L. , Healy, J. , Dutertre, C.-A. , Kwok, I.W.H. , Ng, L.G. , Ginhoux, F. , and Newell, E.W. (2018). Dimensionality reduction for visualizing single-cell data using UMAP. Nat. Biotechnol.
5. Fast unfolding of communities in large networks