An assembly of genomic dataset sequences of the sugar beet root maggotTetanops myopaeformis, TpSBRM_v1.0

Author:

Alkharouf Nadim W.,Chu Chenggen,Klink Vincent P.

Abstract

ABSTRACTThe sugar beet root maggot (SBRM),Tetanops myopaeformis(von Röder), is a devastating pathogen of sugar beet (SB),Beta vulgaris, ssp vulgaris (B. vulgaris), an important food crop, while also being one of only two plants globally from which sugar is widely produced, and accounting for 35% of global raw sugar with an annual farm value of $3 billion in the United States alone. SBRM is the most devastating pathogen of sugar beet in North America. The limited natural resistance ofB. vulgarisnecessitates an understanding of the SBRM genome to facilitate generating knowledge of its basic biology, including the interaction between the pathogen and its host(s). Presented is the de novo assembled draft genome sequence ofT. myopaeformisisolated from field-grownB. vulgarisin North Dakota, USA. The SBRM genome sequence will also be valuable for molecular genetic marker development to facilitate host resistance gene identification and knowledge, including SB polygalacturonase inhibiting protein (PGIP), and development of new control strategies for this pathogen.SPECIFICATIONSOrganism/cell line/tissue:Tetanops myopaeformisSequencer or array type: PacBio Revio flow cellData format: Raw and processedExperimental factors: DNA extracted from a wild-type strain, no treatmentExperimental features: Genome sequencingConsent n/aSample source location: Sugar beet field at Fargo, North Dakota, USADIRECT LINK TO DEPOSITED DATABioSample accession: SAMN37733483Temporary Submission ID: SUB13882507BioProject ID: PRJNA1026092Release date: 2024-09-09, or with the release of linked data, whichever is first

Publisher

Cold Spring Harbor Laboratory

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