Inverted covariate effects for mutated 2nd vs 1st wave Covid-19: high temperature spread biased for young

Author:

Seligmann Hervé,Iggui Siham,Rachdi Mustapha,Vuillerme Nicolas,Demongeot JacquesORCID

Abstract

Abstract(1)BackgroundHere, we characterize COVID-19 2nd waves, following a study presenting negative associations between 1st wave COVID-19 spread parameters and temperature;(2)MethodsVisual examinations of daily increase in confirmed COVID-19 cases in 124 countries, determined 1st and 2ndwaves in 28 countries;(3)Results1st wave spread rate increases with country mean elevation, temperature, time since wave onset, and median age. Spread rates decrease above 1000m, indicating high UV decrease spread rate. For 2nd waves, associations are opposite: viruses adapted to high temperature and to infect young populations. Earliest 2nd waves started April 5-7 at mutagenic high elevations (Armenia, Algeria). 2nd waves occurred also at warm-to-cold season transition (Argentina, Chile). Spread decreases in most (77%) countries. Death-to-total case ratios decrease during the 2ndwave, also when comparing with the same period for countries where the 1st wave is ongoing. In countries with late 1st wave onset, spread rates fit better 2nd than 1st wave-temperature patterns; In countries with ageing populations (examples: Japan, Sweden, Ukraine), 2nd waves only adapted to spread at higher temperatures, not to infect children.(4)Conclusions1st wave viruses evolved towards lower spread and mortality. 2nd wave mutant COVID-19 strain(s) adapted to higher temperature, infecting children and replace (also in cold conditions) 1st wave COVID-19 strains. Counterintuitively, low spread strains replace high spread strains, rendering prognostics and extrapolations uncertain.

Publisher

Cold Spring Harbor Laboratory

Reference10 articles.

1. Temperature decreases spread parameters of the new covid-19 cases dynamics;Biology (Basel),2020

2. Worldometer. Available online: https://www.worldometers.info/coronavirus/(accessed on 6 June 2020).

3. Wikipedia. Available online: https://en.wikipedia.org/wiki/List_of_countries_by_average_elevation (accessed on 6 June 2020).

4. Wikipedia. Available online: https://en.wikipedia.org/wiki/List_of_countries_by_average_yearly_temperature (accessed on 6 June 2020).

5. CNCB. Available online: https://bigd.big.ac.cn/ncov/variation/annotation/variant/24751 (accessed on 6 June 2020).

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