A transcriptional response to replication stress selectively expands a subset ofBRCA2-mutant mammary epithelial cells

Abstract

AbstractBRCA2 mutation carriers preferentially develop luminal-like breast cancers, but it remains unclear how BRCA2 mutations affect mammary epithelial subpopulations. Here, we report that Brca2mut/WTmammary organoids subjected to replication stress activated a transcriptional response that selectively expands Brca2mut/WTluminal cells lacking hormone receptor expression (HR-). While CyTOF analyses revealed comparable epithelial compositions among wildtype and Brca2mut/WTmammary glands, Brca2mut/WTHR- luminal cells exhibited greater organoid formation and preferentially survived and expanded under replication stress. ScRNA-seq analysis corroborated the expansion of HR- luminal cells which express elevated levels of Tetraspanin-8 (Tspan8) andThrspmRNA, and pathways implicated in replication stress survival including Type I interferon responses. Notably, CRISPR/Cas9-mediated deletion ofTspan8orThrspprevented Brca2mut/WTHR- luminal cell expansion. Our findings indicate that Brca2mut/WTcells have an activate a transcriptional response after replication stress that preferentially favours outgrowth of HR- luminal cells through the expression of interferon-responsive and mammary alveolar genes.