Precision environmental health monitoring by longitudinal exposome and multi-omics profiling

Author:

Gao PengORCID,Shen Xiaotao,Zhang Xinyue,Jiang Chao,Zhang Sai,Zhou Xin,Schüssler-Fiorenza Rose Sophia Miryam,Snyder MichaelORCID

Abstract

Conventional environmental health studies have primarily focused on limited environmental stressors at the population level, which lacks the power to dissect the complexity and heterogeneity of individualized environmental exposures. Here, as a pilot case study, we integrated deep-profiled longitudinal personal exposome and internal multi-omics to systematically investigate how the exposome shapes a single individual's phenome. We annotated thousands of chemical and biological components in the personal exposome cloud and found they were significantly correlated with thousands of internal biomolecules, which was further cross-validated using corresponding clinical data. Our results showed that agrochemicals and fungi predominated in the highly diverse and dynamic personal exposome, and the biomolecules and pathways related to the individual's immune system, kidney, and liver were highly associated with the personal external exposome. Overall, this data-driven longitudinal monitoring study shows the potential dynamic interactions between the personal exposome and internal multi-omics, as well as the impact of the exposome on precision health by producing abundant testable hypotheses.

Funder

Leona M. and Harry B. Helmsley Charitable Trust

Stanford Aging and Ethnogeriatrics Research Center

National Institutes of Health/National Institute on Aging

NIH/NIA

NIH Career Development

National Institute of Environmental Health Sciences

Stanford Genetics Bioinformatics Service Center

NIH

Publisher

Cold Spring Harbor Laboratory

Subject

Genetics (clinical),Genetics

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