Whole-Genome Association Analyses of Sleep-disordered Breathing Phenotypes in the NHLBI TOPMed Program

Author:

Cade Brian E.ORCID,Lee JiwonORCID,Sofer TamarORCID,Wang HemingORCID,Zhang Man,Chen HanORCID,Gharib Sina A.ORCID,Gottlieb Daniel J.,Guo Xiuqing,Lane Jacqueline M.ORCID,Liang Jingjing,Lin XihongORCID,Mei Hao,Patel Sanjay R.ORCID,Purcell Shaun M.ORCID,Saxena RichaORCID,Shah Neomi A.,Evans Daniel S.,Hanis Craig L.,Hillman David R.,Mukherjee SutapaORCID,Palmer Lyle J.ORCID,Stone Katie L.,Tranah Gregory J.,Abecasis Gonçalo R.ORCID,Boerwinkle Eric A.,Correa AdolfoORCID,Cupples L. AdrienneORCID,Kaplan Robert C.,Nickerson Deborah A.,North Kari E.ORCID,Psaty Bruce M.,Rotter Jerome I.,Rich Stephen S.ORCID,Tracy Russell P.,Vasan Ramachandran S.ORCID,Wilson James G.,Zhu XiaofengORCID,Redline Susan, ,

Abstract

AbstractSleep-disordered breathing (SDB) is a common disorder associated with significant morbidity. Through the NHLBI Trans-Omics for Precision Medicine (TOPMed) program we report the first whole-genome sequence analysis of SDB. We identified 4 rare gene-based associations with SDB traits in 7,988 individuals of diverse ancestry and 4 replicated common variant associations with inclusion of additional samples (n=13,257). We identified a multi-ethnic set-based rare-variant association (p = 3.48 × 10−8) on chromosome X with ARMCX3. Transcription factor binding site enrichment identified associations with genes implicated with respiratory and craniofacial traits. Results highlighted associations in genes that modulate lung development, inflammation, respiratory rhythmogenesis and HIF1A-mediated hypoxic response.

Publisher

Cold Spring Harbor Laboratory

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