Genome-Enabled Discovery of Anthraquinone Biosynthesis inSenna tora

Author:

Kang Sang-Ho,Pandey Ramesh Prasad,Lee Chang-Muk,Sim Joon-Soo,Jeong Jin-Tae,Choi Beom-Soon,Jung Myunghee,Won So Youn,Oh Tae-Jin,Yu Yeisoo,Kim Nam-Hoon,Lee Ok Ran,Lee Tae-Ho,Bashyal Puspalata,Kim Tae-Su,Kim Chang-Kug,Kim Jung Sun,Ahn Byoung Ohg,Rhee Seung YonORCID,Sohng Jae Kyung

Abstract

AbstractSenna torais a widely used medicinal plant. Its health benefits have been attributed to the large quantity of anthraquinones, but how they are made in plants remains a mystery. To identify the genes responsible for plant anthraquinone biosynthesis, we sequenced and annotated the genome ofS. toraat the chromosome level with contig N50 and super-scaffold N50 of 4.03 Mb and 41.7 Mb. Comparison among related plant species showed that a chalcone synthase-like (CHS-L) gene family has lineage-specifically and rapidly expanded inS. tora. Combining genomics, transcriptomics, metabolomics, and biochemistry, we identified a CHS-L responsible for biosynthesis of anthraquinones, the first example in plants. TheS. torareference genome will accelerate the discovery of biologically active anthraquinone biosynthesis pathways in medicinal plants.One Sentence SummaryThe chromosome-scale reference genome of a medicinal plantSenna tora, transcriptomics, metabolomics, and biochemical analysis provide new insights into anthraquinone biosynthesis in plants.

Publisher

Cold Spring Harbor Laboratory

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