Light-weight Electrophysiology Hardware and Software Platform for Cloud-Based Neural Recording Experiments

Author:

Voitiuk KaterynaORCID,Geng JinghuiORCID,Keefe Matthew G.ORCID,Parks David F.,Sanso Sebastian E.,Hawthorne Nico,Freeman Daniel B.ORCID,Mostajo-Radji Mohammed A.ORCID,Nowakowski Tomasz J.ORCID,Salama Sofie R.ORCID,Teodorescu MirceaORCID,Haussler DavidORCID

Abstract

AbstractObjectiveNeural activity represents a functional readout of neurons that is increasingly important to monitor in a wide range of experiments. Extracellular recordings have emerged as a powerful technique for measuring neural activity because these methods do not lead to the destruction or degradation of the cells being measured. Current approaches to electrophysiology have a low throughput of experiments due to manual supervision and expensive equipment. This bottleneck limits broader inferences that can be achieved with numerous long-term recorded samples.ApproachWe developed Piphys, an inexpensive open source neurophysiological recording platform that consists of both hardware and software. It is easily accessed and controlled via a standard web interface through Internet of Things (IoT) protocols.Main ResultsWe used a Raspberry Pi as the primary processing device and Intan bioamplifier. We designed a hardware expansion circuit board and software to enable voltage sampling and user interaction. This standalone system was validated with primary human neurons, showing reliability in collecting real-time neural activity.SignificanceThe hardware modules and cloud software allow for remote control of neural recording experiments as well as horizontal scalability, enabling long-term observations of development, organization, and neural activity at scale.

Publisher

Cold Spring Harbor Laboratory

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