A Big Data COVID-19 literature pattern discovery using NLP

Author:

Petousis Panayiotis,Stylianou Vasilis

Abstract

AbstractAs our collective knowledge about COVID-19 continues to grow at an exponential rate, it becomes more difficult to organize and observe emerging trends. In this work, we built an open source methodology that uses topic modeling and a pretrained BERT model to organize large corpora of COVID-19 publications into topics over time and over location. Additionally, it assesses the association of medical keywords against COVID-19 over time. These analyses are then automatically pushed into an open source web application that allows a user to obtain actionable insights from across the globe.

Publisher

Cold Spring Harbor Laboratory

Reference17 articles.

1. World Health Organization. (n.d.). Who coronavirus (COVID-19) dashboard. World Health Organization. Retrieved May 17, 2022, from https://covid19.who.int/

2. Risk factors for severity and mortality in adult COVID-19 inpatients in Wuhan

3. Brainard, J. (n.d.). Scientists are drowning in covid-19 papers. can new tools keep them afloat? Retrieved May 17, 2022, from https://www.science.org/content/article/scientists-are-drowning-covid-19-papers-can-new-tools-keep-them-afloat

4. Hutson, Matthew . “Artificial-intelligence tools aim to tame the coronavirus literature.” Nature (2020).

5. Chang, Timothy S. , et al. “Prior diagnoses and medications as risk factors for COVID-19 in a Los Angeles Health System.” MedRxiv (2020).

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