Integrative transcriptomic analysis of tissue-specific metabolic crosstalk after myocardial infarction

Author:

Arif Muhammad,Klevstig Martina,Benfeitas Rui,Doran Stephen,Turkez Hasan,Uhlén Mathias,Clausen Maryam,Wikström Johannes,Etal Damla,Zhang Cheng,Levin Malin,Mardinoglu Adil,Boren Jan

Abstract

Abstract/SummaryMyocardial infarction (MI) promotes a range of systemic effects, many of which are unknown. Here, we investigated the alterations associated with MI progression in heart and other metabolically active tissues (liver, skeletal muscle, and adipose) in a mouse model of MI (induced by ligating the left ascending coronary artery) and sham-operated mice. We performed a genome-wide transcriptomic analysis on tissue samples obtained 6- and 24-hours post MI or sham operation. By generating tissue-specific biological networks, we observed: (1) dysregulation in multiple biological processes (including immune system, mitochondrial dysfunction, fatty-acid beta-oxidation, and RNA and protein processing) across multiple tissues post MI; and (2) tissue-specific dysregulation in biological processes in liver and heart post MI. Finally, we validated our findings in two independent MI cohorts. Overall, our integrative analysis highlighted both common and specific biological responses to MI across a range of metabolically active tissues.

Publisher

Cold Spring Harbor Laboratory

Reference56 articles.

1. Mardinoglu, A. , Boren, J. , Smith, U. , Uhlen, M. & Nielsen, J. The employment of systems biology in gastroenterology and hepatology. Nat. Rev. Gastroenterol. Hepatol (2017).

2. New paradigms for metabolic modeling of human cells

3. Systems biology of metabolism: a driver for developing personalized and precision medicine;Cell metabolism,2017

4. Discovery of therapeutic agents for prostate cancer using genome-scale metabolic modeling and drug repositioning;EBioMedicine,2019

5. Characterization of heterogeneous redox responses in hepatocellular carcinoma patients using network analysis;EBioMedicine,2019

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