A Comprehensive Epithelial Tubo-Ovarian Cancer Risk Prediction Model Incorporating Genetic and Epidemiological Risk Factors

Author:

Lee AndrewORCID,Yang Xin,Tyrer Jonathan,Gentry-Maharaj Aleksandra,Ryan Andy,Mavaddat Nasim,Cunningham Alex P.,Carver Tim,Archer Stephanie,Leslie Goska,Kalsi Jatinderpal,Gaba Faiza,Manchanda Ranjit,Gayther Simon A.,Ramus Susan J.,Walter Fiona M.,Tischkowitz Marc,Jacobs Ian,Menon Usha,Easton Douglas F.,Pharoah Paul P.D.ORCID,Antoniou Antonis C.

Abstract

AbstractBackgroundEpithelial tubo-ovarian cancer (EOC) has high mortality partly due to late diagnosis. Prevention is available but may be associated with adverse effects. A multifactorial risk model based on known genetic and epidemiological risk factors (RFs) for EOC can help identify females at higher risk who could benefit from targeted screening and prevention.MethodsWe developed a multifactorial EOC risk model for females of European ancestry incorporating the effects of pathogenic variants (PVs) in BRCA1, BRCA2, RAD51C, RAD51D and BRIP1, a polygenic risk score (PRS) of arbitrary size, the effects of RFs and explicit family history (FH) using a synthetic model approach. The PRS, PV and RFs were assumed to act multiplicatively.ResultsBased on a currently available PRS for EOC that explains 5% of the EOC polygenic variance, the estimated lifetime risks under the multifactorial model in the general population vary from 0.5% to 4.6% for the 1st to 99th percentiles of the EOC risk-distribution. The corresponding range for females with an affected first-degree relative is 1.9% to 10.3%. Based on the combined risk distribution, 33% of RAD51D PV carriers are expected to have a lifetime EOC risk of less than 10%. RFs provided the widest distribution, followed by the PRS. In an independent partial model validation, absolute and relative 5-year risks were well-calibrated in quintiles of predicted risk.ConclusionThis multifactorial risk model can facilitate stratification, in particular among females with FH of cancer and/or moderate- and high-risk PVs. The model is available via the CanRisk Tool (www.canrisk.org).

Publisher

Cold Spring Harbor Laboratory

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