Rapid submillimeter QSM and R2*mapping using interleaved multi-shot 3D-EPI at 7 and 3 Tesla

Author:

Stirnberg RüdigerORCID,Deistung AndreasORCID,Reichenbach Jürgen R.ORCID,Breteler Monique M. B.ORCID,Stöcker TonyORCID

Abstract

AbstractPurposeTo explore the high signal-to-noise ratio (SNR) efficiency of interleaved multi-shot 3D-EPI for fast and robust high-resolution whole-brain quantitative susceptibility (QSM) andmapping at 7T and 3T.MethodsSingle- and multi-TE segmented 3D-EPI is combined with conventional CAIPIRINHA undersampling for up to 72-fold effective gradient echo (GRE) imaging acceleration. Across multiple averages, scan parameters are varied (e.g. dual-polarity frequency-encoding) to additionally correct forB0-induced artifacts, geometric distortions and motion retrospectively. A comparison to established GRE protocols is made. Resolutions range from 1.4mm isotropic (1 multi-TE average in 36s) up to 0.4mm isotropic (2 single-TE averages in approximately 6 minutes) with whole-head coverage.ResultsOnly 1-4 averages are needed for sufficient SNR with 3D-EPI, depending on resolution and field strength. Fast scanning and small voxels together with retrospective corrections result in substantially reduced image artifacts, which improves susceptibility andmapping. Additionally, much finer details are obtained in susceptibility-weighted image projections through significantly reduced partial voluming.ConclusionUsing interleaved multi-shot 3D-EPI, single-TE and multi-TE data can readily be acquired 10 times faster than with conventional, accelerated GRE imaging. Even 0.4mm isotropic whole-head QSM within 6 minutes becomes feasible at 7T. At 3T, motion-robust and distortion-free 0.8mm isotropic whole-brain QSM andmapping in less than 7 minutes becomes clinically feasible. Stronger gradient systems may allow for even higher effective acceleration rates through larger EPI factors while maintaining optimal contrast.

Publisher

Cold Spring Harbor Laboratory

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