Ribo-seQC: comprehensive analysis of cytoplasmic and organellar ribosome profiling data

Author:

Calviello LorenzoORCID,Sydow DominiqueORCID,Harnett Dermot,Ohler Uwe

Abstract

AbstractSummaryRibosome profiling enables genome-wide analysis of translation with unprecedented resolution. We present Ribo-seQC, a versatile tool for the comprehensive analysis of Ribo-seq data, providing in-depth insights on data quality and translational profiles for cytoplasmic and organelle ribosomes. Ribo-seQC automatically generates platform-independent HTML reports, offering a detailed and easy-to-share basis for collaborative Ribo-seq projects.AvailabilityRibo-seQC is available at https://github.com/ohlerlab/RiboseQC and submitted to Bioconductor.Contactuwe.ohler@mdc-berlin.de

Publisher

Cold Spring Harbor Laboratory

Reference14 articles.

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