Sequencing of over 100,000 individuals identifies multiple genes and rare variants associated with Crohns disease susceptibility

Author:

Sazonovs Aleksejs,Stevens Christine R.ORCID,Venkataraman Guhan R.ORCID,Yuan KaiORCID,Avila Brandon,Abreu Maria T.ORCID,Ahmad Tariq,Allez Matthieu,Ananthakrishnan Ashwin N.,Atzmon Gil,Baras Aris,Barrett Jeffrey C.,Barzilai Nir,Beaugerie Laurent,Beecham Ashley,Bernstein Charles N.ORCID,Bitton Alain,Bokemeyer BerndORCID,Chan Andrew,Chung Daniel,Cleynen IsabelleORCID,Cosnes Jacques,Cutler David J.,Daly Allan,Damas Oriana M.ORCID,Datta Lisa W.,Dawany Noor,Devoto MarcellaORCID,Dodge Sheila,Ellinghaus Eva,Fachal Laura,Farkkila Martti,Faubion WilliamORCID,Ferreira Manuel,Franchimont DenisORCID,Gabriel Stacey B.,Georges MichelORCID,Gettler Kyle,Giri Mamta,Glaser BenjaminORCID,Goerg Siegfried,Goyette Philippe,Graham Daniel,Hämäläinen Eija,Haritunians TalinORCID,Heap Graham A.,Hiltunen Mikko,Hoeppner MarcORCID,Horowitz Julie E.,Irving Peter,Iyer Vivek,Jalas Chaim,Kelsen JudithORCID,Khalili HamedORCID,Kirschner Barbara S.ORCID,Kontula Kimmo,Koskela Jukka T.ORCID,Kugathasan Subra,Kupcinskas Juozas,Lamb Christopher A.ORCID,Laudes Matthias,Levine Adam P.ORCID,Lewis JamesORCID,Liefferinckx ClaireORCID,Loescher Britt-SabinaORCID,Louis Edouard,Mansfield JohnORCID,May Sandra,McCauley Jacob L.ORCID,Mengesha EmebetORCID,Mni Myriam,Moayyedi PaulORCID,Moran Christopher J.ORCID,Newberry RodneyORCID,O’Charoen Sirimon,Okou David T.ORCID,Oldenburg Bas,Ostrer Harry,Palotie AarnoORCID,Pekow Joel,Peter IngaORCID,Pierik Marieke J.,Ponsioen Cyriel Y.,Pontikos NikolasORCID,Prescott Natalie,Pulver Ann E.,Rahmouni SouadORCID,Rice Daniel L.,Saavalainen Päivi,Sands BruceORCID,Sartor R. BalfourORCID,Schiff Elena R.ORCID,Schreiber StefanORCID,Schuum L. Philip,Segal Anthony W.ORCID,Seksik PhilippeORCID,Shawky Rasha,Sheikh Shehzad Z.,Silverberg Mark,Simmons Alison,Skeiceviciene JurgitaORCID,Sokol HarryORCID,Solomonson MatthewORCID,Somineni Hari,Sun Dylan,Targan Stephan,Turner Dan,Uhlig Holm H.,van der Meulen Andrea E.,Vermeire Severine,Verstockt Sare,Voskuil Michiel D.ORCID,Winter Harland S.ORCID,Young Justine,Duerr Richard H.ORCID,Franke AndreORCID,Brant Steven R.ORCID,Cho Judy,Weersma Rinse K.,Parkes Miles,Xavier RamnikORCID,Rivas Manuel A.ORCID,Rioux John D.ORCID,McGovern Dermot,Huang HailiangORCID,Anderson Carl A.ORCID,Daly Mark J.ORCID, , , , , , , , ,

Abstract

AbstractGenome-wide association studies (GWAS) have identified hundreds of loci associated with Crohns disease (CD), however, as with all complex diseases, deriving pathogenic mechanisms from these non-coding GWAS discoveries has been challenging. To complement GWAS and better define actionable biological targets, we analysed sequenced data from more than 30,000 CD patients and 80,000 population controls. We observe rare coding variants in established CD susceptibility genes as well as ten genes where coding variation directly implicates the gene in disease risk for the first time.

Publisher

Cold Spring Harbor Laboratory

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