Open science resources from the Tara Pacific expedition across coral reef and surface ocean ecosystems

Author:

Lombard FabienORCID,Bourdin Guillaume,Pesant Stéphane,Agostini Sylvain,Baudena Alberto,Boissin Emilie,Cassar Nicolas,Clampitt Megan,Conan Pascal,Silva Ophélie Da,Dimier Céline,Douville Eric,Elineau Amanda,Fin Jonathan,Flores J. Michel,Ghiglione Jean François,Hume Benjamin C.C.,Jalabert Laetitia,John Seth G.,Kelly Rachel L.,Koren Ilan,Lin Yajuan,Marie Dominique,McMinds Ryan,Mériguet Zoé,Metzl Nicolas,Paz-García David A.,Pedrotti Maria Luiza,Poulain Julie,Pujo-Pay Mireille,Ras Joséphine,Reverdin Gilles,Romac Sarah,Rouan Alice,Röttinger Eric,Vardi Assaf,Voolstra Christian R.,Moulin Clémentine,Iwankow Guillaume,Banaigs Bernard,Bowler Chris,de Vargas Colomban,Forcioli Didier,Furla Paola,Galand Pierre E.,Gilson Eric,Reynaud Stéphanie,Sunagawa Shinichi,Sullivan Matthew B.,Thomas Olivier,Troublé Romain,Thurber Rebecca Vega,Wincker Patrick,Zoccola Didier,Allemand Denis,Planes Serge,Boss Emmanuel,Gorsky Gaby

Abstract

AbstractThe Tara Pacific expedition (2016-2018) sampled coral ecosystems around 32 islands in the Pacific Ocean and the ocean surface waters at 249 locations, resulting in the collection of nearly 58,000 samples. The expedition was designed to systematically study warm coral reefs and included the collection of corals, fish, plankton, and seawater samples for advanced biogeochemical, molecular, and imaging analysis. Here we provide a complete description of the sampling methodology, and we explain how to explore and access the different datasets generated by the expedition. Environmental context data were obtained from taxonomic registries, gazetteers, almanacs, climatologies, operational biogeochemical models, and satellite observations. The quality of the different environmental measures has been validated not only by various quality control steps but also through a global analysis allowing the comparison with known environmental large-scale structures. Such a wide released datasets opens the perspective to address a wide range of scientific questions.

Publisher

Cold Spring Harbor Laboratory

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