The emergence of goblet inflammatory or ITGB6hinasal progenitor cells determines age-associated SARS-CoV-2 pathogenesis

Author:

Woodall MaximillianORCID,Cujba Ana-MariaORCID,Worlock Kaylee B.ORCID,Case Katie-MarieORCID,Masonou TerezaORCID,Yoshida MasahiroORCID,Polanski Krzysztof,Huang Ni,Lindeboom Rik G. H.,Mamanova Lira,Bolt Liam,Richardson Laura,Ellis SamuelORCID,Palor MachaelaORCID,Burgoyne ThomasORCID,Pinto AndreiaORCID,Moulding DaleORCID,McHugh Timothy D.ORCID,Saleh Aarash,Kilich Eliz,Mehta PujaORCID,O’Callaghan Chris,Zhou Jie,Barclay WendyORCID,Coppi Paolo DeORCID,Butler Colin R.ORCID,Vinette Heloise,Roy Sunando,Breuer JudithORCID,Chambers Rachel C.,Heywood Wendy E.ORCID,Mills KevinORCID,Hynds Robert E.ORCID,Teichmann Sarah A.ORCID,Meyer Kerstin B.ORCID,Nikolić Marko Z.ORCID,Smith Claire M.ORCID

Abstract

AbstractChildren infected with SARS-CoV-2 rarely progress to respiratory failure, but the risk of mortality in infected people over 85 years of age remains high, despite vaccination and improving treatment options. Here, we take a comprehensive, multidisciplinary approach to investigate differences in the cellular landscape and function of paediatric (<11y), adult (30- 50y) and elderly (>70y) nasal epithelial cells experimentally infected with SARS-CoV-2. Our data reveal that nasal epithelial cell subtypes show different tropism to SARS-CoV-2, correlating with age, ACE2 and TMPRSS2 expression. Ciliated cells are a viral replication centre across all age groups, but a distinct goblet inflammatory subtype emerges in infected paediatric cultures, identifiable by high expression of interferon stimulated genes and truncated viral genomes. In contrast, infected elderly cultures show a proportional increase in ITGB6hiprogenitors, which facilitate viral spread and are associated with dysfunctional epithelial repair pathways.Graphical Abstract

Publisher

Cold Spring Harbor Laboratory

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