A Dual, Systematic Approach to Malaria Diagnostic Biomarker Discovery

Author:

Yerlikaya Seda1,Owusu Ewurama D A12,Frimpong Augustina345,DeLisle Robert Kirk6,Ding Xavier C1

Affiliation:

1. Foundation for Innovative New Diagnostics, Geneva, Switzerland

2. Department of Medical Laboratory Sciences, School of Biomedical and Allied Health Sciences, College of Health Sciences, University of Ghana, Accra, Ghana

3. West Africa Centre for Cell Biology of Infectious Pathogens, Department of Biochemistry, Cell and Molecular Biology, University of Ghana, Accra, Ghana

4. Immunology Department, Noguchi Memorial Institute for Medical Research, College of Health Sciences, University of Ghana, Accra, Ghana

5. African Institute for Mathematical Sciences, Accra, Ghana

6. Colorado Computational, LLC, Longmont, Colorado, USA

Abstract

Abstract Background The emergence and spread of Plasmodium falciparum parasites that lack HRP2/3 proteins and the resulting decreased utility of HRP2-based malaria rapid diagnostic tests (RDTs) prompted the World Health Organization and other global health stakeholders to prioritize the discovery of novel diagnostic biomarkers for malaria. Methods To address this pressing need, we adopted a dual, systematic approach by conducting a systematic review of the literature for publications on diagnostic biomarkers for uncomplicated malaria and a systematic in silico analysis of P. falciparum proteomics data for Plasmodium proteins with favorable diagnostic features. Results Our complementary analyses led us to 2 novel malaria diagnostic biomarkers compatible for use in an RDT format: glyceraldehyde 3-phosphate dehydrogenase and dihydrofolate reductase-thymidylate synthase. Conclusions Overall, our results pave the way for the development of next-generation malaria RDTs based on new antigens by identifying 2 lead candidates with favorable diagnostic features and partially de-risked product development prospects.

Funder

Department of Foreign Affairs and Trade, Australian Government

Publisher

Oxford University Press (OUP)

Subject

Infectious Diseases,Microbiology (medical)

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