Effect of Time Since Death on Multipathogen Molecular Test Results of Postmortem Specimens Collected Using Minimally Invasive Tissue Sampling Techniques

Author:

Dawa Jeanette12,Walong Edwin2,Onyango Clayton3,Mathaiya John4,Muturi Peter1,Bunei Milka1,Ochieng Washington2,Barake Walter2,Seixas Josilene N5,Mayieka Lillian6,Ochieng Melvin6,Omballa Victor6,Lidechi Shirley6,Hunsperger Elizabeth3,Otieno Nancy A6,Ritter Jana M5,Widdowson Marc-Alain37,Diaz Maureen H8,Winchell Jonas M8,Martines Roosecelis B5,Zaki Sherif R5,Chaves Sandra S9ORCID

Affiliation:

1. Washington State University, Global Health Programs (Kenya Office), Nairobi, Kenya

2. College of Health Sciences, University of Nairobi, Nairobi, Kenya

3. Division of Global Health Protection, Centers for Disease Control and Prevention, Nairobi, Kenya

4. Department of Pathology, Thika Level 5 Hospital, Kiambu County, Kenya

5. Infectious Diseases Pathology Branch, Division of High-Consequence Pathogens and Pathology, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA

6. Centre for Global Health Research, Kenya Medical Research Institute, Nairobi, Kenya

7. Institute of Tropical Medicine, Antwerp, Belgium

8. Respiratory Diseases Branch, Division of Bacterial Diseases, National Center for Immunization and Respiratory Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA

9. Influenza Program, Centers for Disease Control and Prevention, Nairobi, Kenya

Abstract

Abstract Background We used postmortem minimally invasive tissue sampling (MITS) to assess the effect of time since death on molecular detection of pathogens among respiratory illness–associated deaths. Methods Samples were collected from 20 deceased children (aged 1–59 months) hospitalized with respiratory illness from May 2018 through February 2019. Serial lung and/or liver and blood samples were collected using MITS starting soon after death and every 6 hours thereafter for up to 72 hours. Bodies were stored in the mortuary refrigerator for the duration of the study. All specimens were analyzed using customized multipathogen TaqMan® array cards (TACs). Results We identified a median of 3 pathogens in each child’s lung tissue (range, 1–8; n = 20), 3 pathogens in each child’s liver tissue (range, 1–4; n = 5), and 2 pathogens in each child’s blood specimen (range, 0–4; n = 5). Pathogens were not consistently detected across all collection time points; there was no association between postmortem interval and the number of pathogens detected (P = .43) and no change in TAC cycle threshold value over time for pathogens detected in lung tissue. Human ribonucleoprotein values indicated that specimens collected were suitable for testing throughout the study period. Conclusions Results suggest that lung, liver, and blood specimens can be collected using MITS procedures up to 4 days after death in adequately preserved bodies. However, inconsistent pathogen detection in samples needs careful consideration before drawing definitive conclusions on the etiologic causes of death.

Funder

Bill and Melinda Gates Foundation

Publisher

Oxford University Press (OUP)

Subject

Infectious Diseases,Microbiology (medical)

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