A chromosome-level genome assembly for the smoky rubyspot damselfly (Hetaerina titia)

Author:

Patterson Christophe W1ORCID,Bonillas-Monge Erandi1,Brennan Adrian1ORCID,Grether Gregory F2ORCID,Mendoza-Cuenca Luis3,Tucker Rachel4,Vega-Sánchez Yesenia M5,Drury Jonathan1ORCID

Affiliation:

1. Department of Biosciences, Durham University , Durham , United Kingdom

2. Department of Ecology & Evolutionary Biology, University of California, Los Angeles , California, LA , United States

3. Facultad de Biología, Universidad Michoacana de San Nicolás de Hidalgo , Morelia , México

4. NERC Environmental Omics Facility, University of Sheffield , Sheffield , United Kingdom

5. Instituto de Investigaciones en Ecosistemas y Sustentabilidad, Universidad Nacional Autónoma de México , Morelia , México

Abstract

Abstract Smoky rubyspot damselflies (Hetaerina titia Drury, 1773) are one of the most commonly encountered odonates along streams and rivers on both slopes of Central America and the Atlantic drainages in the United States and southern Canada. Owing to their highly variable wing pigmentation, they have become a model system for studying sexual selection and interspecific behavioral interference. Here, we sequence and assemble the genome of a female smoky rubyspot. Of the primary assembly (i.e. the principle pseudohaplotype), 98.8% is made up of 12 chromosomal pseudomolecules (2N = 22A + X). There are 75 scaffolds in total, an N50 of 120 Mb, a contig-N50 of 0.64 Mb, and a high arthropod BUSCO score [C: 97.6% (S: 97.3%, D: 0.3%), F: 0.8%, M: 1.6%]. We then compare our assembly to that of the blue-tailed damselfly genome (Ischnura elegans), the most complete damselfly assembly to date, and a recently published assembly for an American rubyspot damselfly (Hetaerina americana). Collectively, these resources make Hetaerina a genome-enabled genus for further studies of the ecological and evolutionary forces shaping biological diversity.

Funder

Environmental Omics Facility

Cross-disciplinary Research for Discovery Science

Durham University

NSF

Publisher

Oxford University Press (OUP)

Subject

Genetics (clinical),Genetics,Molecular Biology,Biotechnology

Reference41 articles.

1. Interspecific aggression and character displacement of competitor recognition in Hetaerina damselflies;Anderson,2010

2. An exploration of genome size diversity in dragonflies and damselflies (Insecta: Odonata);Ardila-Garcia,2009

3. BLAST+: architecture and applications;Camacho;BMC Bioinf,2009

4. BlobToolKit – interactive quality assessment of genome assemblies;Challis,2020

5. Haplotype-resolved de novo assembly using phased assembly graphs with hifiasm;Cheng;Nat Methods,2021

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