The N-terminal domains of NLR immune receptors exhibit structural and functional similarities across divergent plant lineages

Author:

Chia Khong-Sam1ORCID,Kourelis Jiorgos2ORCID,Teulet Albin3ORCID,Vickers Martin4ORCID,Sakai Toshiyuki2ORCID,Walker Joseph F5ORCID,Schornack Sebastian3ORCID,Kamoun Sophien2ORCID,Carella Philip1ORCID

Affiliation:

1. Cell and Developmental Biology, John Innes Centre , Norwich NR4 7UH , UK

2. The Sainsbury Laboratory, University of East Anglia , Norwich NR4 7UH , UK

3. Sainsbury Laboratory, University of Cambridge , Cambridge CB2 1LR , UK

4. Computational and Systems Biology, John Innes Centre , Norwich NR4 7UH , UK

5. Department of Biological Sciences, University of Illinois at Chicago , Chicago, IL 60607 , USA

Abstract

Abstract Nucleotide-binding domain and leucine-rich repeat (NLR) proteins are a prominent class of intracellular immune receptors in plants. However, our understanding of plant NLR structure and function is limited to the evolutionarily young flowering plant clade. Here, we describe an extended spectrum of NLR diversity across divergent plant lineages and demonstrate the structural and functional similarities of N-terminal domains that trigger immune responses. We show that the broadly distributed coiled-coil (CC) and toll/interleukin-1 receptor (TIR) domain families of nonflowering plants retain immune-related functions through translineage activation of cell death in the angiosperm Nicotiana benthamiana. We further examined a CC subfamily specific to nonflowering lineages and uncovered an essential N-terminal MAEPL motif that is functionally comparable with motifs in resistosome-forming CC-NLRs. Consistent with a conserved role in immunity, the ectopic activation of CCMAEPL in the nonflowering liverwort Marchantia polymorpha led to profound growth inhibition, defense gene activation, and signatures of cell death. Moreover, comparative transcriptomic analyses of CCMAEPL activity delineated a common CC-mediated immune program shared across evolutionarily divergent nonflowering and flowering plants. Collectively, our findings highlight the ancestral nature of NLR-mediated immunity during plant evolution that dates its origin to at least ∼500 million years ago.

Funder

UKRI Biotechnology and Biological Sciences Research Council

Gatsby Charitable Foundation

University of Illinois Chicago

Publisher

Oxford University Press (OUP)

Reference89 articles.

1. An N-terminal motif in NLR immune receptors is functionally conserved across distantly related plant species;Adachi;eLife,2019

2. NLR singletons, pairs, and networks: evolution, assembly, and regulation of the intracellular immunoreceptor circuitry of plants;Adachi;Curr Opin Plant Biol.,2019

3. Genetic analysis of the liverwort Marchantia polymorpha reveals that R2R3MYB activation of flavonoid production in response to abiotic stress is an ancient character in land plants;Albert;New Phytol,2018

4. Alien domains shaped the modular structure of plant NLR proteins;Andolfo;Genome Biol Evol.,2019

5. Fitting a mixture model by expectation maximization to discover motifs in biopolymers;Bailey;Proc Int Conf Intell Syst Mol Biol,1994

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