Structural constraints of pyocin S2 import through the ferripyoverdine receptor FpvAI

Author:

Goult Jonathan D1ORCID,Van Daniel C L2ORCID,Taylor Yasmin V2,Inns Patrick G1,Kaminska Renata1ORCID,Vesely Martin1ORCID,Kleanthous Colin1ORCID,Paci Emanuele3ORCID

Affiliation:

1. Department of Biochemistry, University of Oxford , Oxford OX1 3QU , UK

2. Astbury Centre for Structural Molecular Biology, University of Leeds , Leeds LS2 9JT , UK

3. Dipartimento di Fisica e Astronomia, Università di Bologna, Bologna 40127, Italy

Abstract

Abstract TonB-dependent transporters (TBDTs) mediate energized transport of essential nutrients into gram-negative bacteria. TBDTs are increasingly being exploited for the delivery of antibiotics to drug-resistant bacteria. While much is known about ground state complexes of TBDTs, few details have emerged about the transport process itself. In this study, we exploit bacteriocin parasitization of a TBDT to probe the mechanics of transport. Previous work has shown that the N-terminal domain of Pseudomonas aeruginosa–specific bacteriocin pyocin S2 (PyoS2NTD) is imported through the pyoverdine receptor FpvAI. PyoS2NTD transport follows the opening of a proton-motive force-dependent pore through FpvAI and the delivery of its own TonB box that engages TonB. We use molecular models and simulations to formulate a complete translocation pathway for PyoS2NTD that we validate using protein engineering and cytotoxicity measurements. We show that following partial removal of the FpvAI plug domain which occludes the channel, the pyocin's N-terminus enters the channel by electrostatic steering and ratchets to the periplasm. Application of force, mimicking that exerted by TonB, leads to unraveling of PyoS2NTD as it squeezes through the channel. Remarkably, while some parts of PyoS2NTD must unfold, complete unfolding is not required for transport, a result we confirmed by disulfide bond engineering. Moreover, the section of the FpvAI plug that remains embedded in the channel appears to serve as a buttress against which PyoS2NTD is pushed to destabilize the domain. Our study reveals the limits of structural deformation that accompanies import through a TBDT and the role the TBDT itself plays in accommodating transport.

Funder

MRC

Cellular and Structural Biology DPhil studentship

Wellcome Trust

European Research Council

Biotechnology and Biological Science Research Council Project

Publisher

Oxford University Press (OUP)

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