An overview of the National COVID-19 Chest Imaging Database: data quality and cohort analysis

Author:

Cushnan Dominic1ORCID,Bennett Oscar2ORCID,Berka Rosalind2,Bertolli Ottavia2ORCID,Chopra Ashwin2,Dorgham Samie2,Favaro Alberto2,Ganepola Tara2ORCID,Halling-Brown Mark3ORCID,Imreh Gergely2ORCID,Jacob Joseph4ORCID,Jefferson Emily56ORCID,Lemarchand François1ORCID,Schofield Daniel1ORCID,Wyatt Jeremy C78,

Affiliation:

1. AI Lab, NHSX, Skipton House, 80 London Road, London SE1 6LH, UK

2. Faculty, 54 Welbeck Street, London W1G 9XS, UK

3. Scientific Computing, Royal Surrey NHS Foundation Trust, Egerton Road, Guildford GU2 7XX, UK

4. UCL Respiratory, 1st Floor, Rayne Institute, University College London, London WC1E 6JF, UK

5. Health Data Research UK, Gibbs Building, 215 Euston Road, London NW1 2BE, UK

6. Health Informatics Centre (HIC), School of Medicine, University of Dundee, DD1 4HN, Dundee, UK

7. Emeritus Professor of Digital Healthcare, University of Southampton, Southampton SO17 1BJ, UK

8. NHSX, Skipton House, 80 London Road, London SE1 6LH, UK

Abstract

Abstract Background The National COVID-19 Chest Imaging Database (NCCID) is a centralized database containing mainly chest X-rays and computed tomography scans from patients across the UK. The objective of the initiative is to support a better understanding of the coronavirus SARS-CoV-2 disease (COVID-19) and the development of machine learning technologies that will improve care for patients hospitalized with a severe COVID-19 infection. This article introduces the training dataset, including a snapshot analysis covering the completeness of clinical data, and availability of image data for the various use-cases (diagnosis, prognosis, longitudinal risk). An additional cohort analysis measures how well the NCCID represents the wider COVID-19–affected UK population in terms of geographic, demographic, and temporal coverage. Findings The NCCID offers high-quality DICOM images acquired across a variety of imaging machinery; multiple time points including historical images are available for a subset of patients. This volume and variety make the database well suited to development of diagnostic/prognostic models for COVID-associated respiratory conditions. Historical images and clinical data may aid long-term risk stratification, particularly as availability of comorbidity data increases through linkage to other resources. The cohort analysis revealed good alignment to general UK COVID-19 statistics for some categories, e.g., sex, whilst identifying areas for improvements to data collection methods, particularly geographic coverage. Conclusion The NCCID is a growing resource that provides researchers with a large, high-quality database that can be leveraged both to support the response to the COVID-19 pandemic and as a test bed for building clinically viable medical imaging models.

Funder

NIHR

Publisher

Oxford University Press (OUP)

Subject

Computer Science Applications,Health Informatics

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