PhenoMeNal: processing and analysis of metabolomics data in the cloud-Reference-Cited by-同舟云学术

PhenoMeNal: processing and analysis of metabolomics data in the cloud

Published:2018-12-07 Issue:2 Volume:8 Page:
ISSN:2047-217X
Container-title:GigaScience
language:en
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Author:

Peters Kristian¹^ORCID,Bradbury James²,Bergmann Sven³⁴,Capuccini Marco⁵⁶^ORCID,Cascante Marta⁷^ORCID,de Atauri Pedro⁷^ORCID,Ebbels Timothy M D⁸,Foguet Carles⁷^ORCID,Glen Robert⁸⁹^ORCID,Gonzalez-Beltran Alejandra¹⁰^ORCID,Günther Ulrich L¹¹,Handakas Evangelos⁸,Hankemeier Thomas¹²^ORCID,Haug Kenneth¹³^ORCID,Herman Stephanie⁶¹⁴^ORCID,Holub Petr¹⁵^ORCID,Izzo Massimiliano¹⁰^ORCID,Jacob Daniel¹⁶^ORCID,Johnson David¹⁰¹⁷^ORCID,Jourdan Fabien¹⁸,Kale Namrata¹³^ORCID,Karaman Ibrahim¹⁹^ORCID,Khalili Bita³⁴,Emami Khonsari Payam¹⁴^ORCID,Kultima Kim¹⁴^ORCID,Lampa Samuel⁶^ORCID,Larsson Anders⁶²⁰^ORCID,Ludwig Christian²¹,Moreno Pablo¹³^ORCID,Neumann Steffen¹²²^ORCID,Novella Jon Ander⁶²⁰^ORCID,O'Donovan Claire¹³^ORCID,Pearce Jake T M⁸^ORCID,Peluso Alina⁸^ORCID,Piras Marco Enrico²³^ORCID,Pireddu Luca²³^ORCID,Reed Michelle A C¹¹^ORCID,Rocca-Serra Philippe¹⁰^ORCID,Roger Pierrick²⁴,Rosato Antonio²⁵^ORCID,Rueedi Rico³⁴^ORCID,Ruttkies Christoph¹^ORCID,Sadawi Noureddin²⁶⁸^ORCID,Salek Reza M¹³^ORCID,Sansone Susanna-Assunta¹⁰^ORCID,Selivanov Vitaly⁷^ORCID,Spjuth Ola⁶^ORCID,Schober Daniel¹^ORCID,Thévenot Etienne A²⁴^ORCID,Tomasoni Mattia³⁴,van Rijswijk Merlijn²⁷²⁸^ORCID,van Vliet Michael¹²^ORCID,Viant Mark R²²⁹^ORCID,Weber Ralf J M²²⁹^ORCID,Zanetti Gianluigi²³^ORCID,Steinbeck Christoph³⁰^ORCID

Affiliation:

1. Leibniz Institute of Plant Biochemistry, Stress and Developmental Biology, Weinberg 3, 06120 Halle (Saale), Germany

2. School of Biosciences, University of Birmingham, Edgbaston, Birmingham, B15 2TT, United Kingdom

3. Department of Computational Biology, University of Lausanne, Lausanne, Switzerland

4. Swiss Institute of Bioinformatics, Lausanne, Switzerland

5. Division of Scientific Computing, Department of Information Technology, Uppsala University, Sweden

6. Department of Pharmaceutical Biosciences, Uppsala University, Box 591, 751 24 Uppsala, Sweden

7. Department of Biochemistry and Molecular Biomedicine, Universitat de Barcelona; Centro de Investigación Biomédica en Red de Enfermedades Hepáticas y Digestivas (CIBEREHD), Instituto de Salud Carlos III (ISCIII), Spain

8. Department of Surgery & Cancer, Imperial College London, South Kensington, London, SW7 2AZ, United Kingdom

9. Centre for Molecular Informatics, Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB21EW, United Kingdom

10. Oxford e-Research Centre, Department of Engineering Science, University of Oxford, 7 Keble Road, OX1 3QG, Oxford, United Kingdom

11. Institute of Cancer and Genomic Sciences, University of Birmingham, Edgbaston, Birmingham, B15 2TT, United Kingdom

12. Division of Systems Biomedicine and Pharmacology, Leiden Academic Centre for Drug Research (LACDR), Leiden University, Leiden, 2333 CC, The Netherlands

13. European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, United Kingdom

14. Department of Medical Sciences, Clinical Chemistry, Uppsala University, 751 85 Uppsala, Sweden

15. BBMRI-ERIC, Graz, Austria

16. INRA, University of Bordeaux, Plateforme Métabolome Bordeaux-MetaboHUB, 33140 Villenave d'Ornon, France

17. Department of Informatics and Media, Uppsala University, Box 513, 751 20 Uppsala, Sweden

18. INRA - French National Institute for Agricultural Research, UMR1331, Toxalim, Research Centre in Food Toxicology, Toulouse, France

19. Department of Epidemiology and Biostatistics, School of Public Health, Imperial College London, St. Mary's Campus, Norfolk Place, W2 1PG, London, United Kingdom

20. National Bioinformatics Infrastructure Sweden, Uppsala University, Uppsala, Sweden

21. Institute of Metabolism and Systems Research (IMSR), University of Birmingham, Edgbaston, Birmingham, B15 2TT, United Kingdom

22. German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5e, 04103 Leipzig, Germany

23. Distributed Computing Group, CRS4, Pula, Italy

24. CEA, LIST, Laboratory for Data Analysis and Systems’ Intelligence, MetaboHUB, Gif-Sur-Yvette F-91191, France

25. Magnetic Resonance Center (CERM) and Department of Chemistry, University of Florence and CIRMMP, 50019 Sesto Fiorentino, Florence, Italy

26. Department of Computer Science, College of Engineering, Design and Physical Sciences, Brunel University, London, UK

27. Netherlands Metabolomics Center, Leiden, 2333 CC, Netherlands

28. ELIXIR-NL, Dutch Techcentre for Life Sciences, Utrecht, 3503 RM, Netherlands

29. Phenome Centre Birmingham, University of Birmingham, Edgbaston, Birmingham, B15 2TT, United Kingdom

30. Cheminformatics and Computational Metabolomics, Institute for Analytical Chemistry, Lessingstr. 8, 07743 Jena, Germany

Funder

European Commission PhenoMeNal

Publisher

Oxford University Press (OUP)

Subject

Computer Science Applications,Health Informatics

Link

http://academic.oup.com/gigascience/article-pdf/8/2/giy149/27784949/giy149.pdf

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