Using publicly available, interactive epidemiological dashboards: an innovative approach to sharing data from the Rakai Community Cohort Study

Author:

Footer Kevin1,Lake Camille M1,Porter Joshua R1,Ha Grace K1,Ahmed Tanvir1,Glogowski Alex1,Ndyanabo Anthony2,Grabowski M Kate3,Chang Larry W45,Ssekasanvu Joseph4,Kagaayi Joseph2,Serwadda David M2,Mckina Jackie2,Whalen Christopher1,Ssentongo Lloyd1,Nsimbi Ivan1,Kakeeto Benedicto1,Kigozi Godfrey2,Ssekubugu Robert2,Lutalo Tom2,Wawer Maria J4,Gray Ronald H4,Reynolds Steven J256,Rosenthal Alex1,Quinn Thomas C46,Tartakovsky Michael1

Affiliation:

1. Office of Cyber Infrastructure & Computational Biology, National Institute of Allergy and Infectious Diseases, National Institutes of Health , Rockville, MD 20892, United States

2. Rakai Health Sciences Program , Kalisizo, Uganda

3. Department of Pathology, Johns Hopkins School of Medicine , Baltimore, MD 21287, United States

4. Johns Hopkins Bloomberg School of Public Health , Baltimore, MD 21205, United States

5. Johns Hopkins School of Medicine , Baltimore, MD 21205, United States

6. Laboratory of Immunoregulation, Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health , Rockville, MD 20892, United States

Abstract

Abstract Objectives Public sharing of de-identified biomedical data promotes collaboration between researchers and accelerates the development of disease prevention and treatment strategies. However, open-access data sharing presents challenges to researchers who need to protect the privacy of study participants, ensure that data are used appropriately, and acknowledge the inputs of all involved researchers. This article presents an approach to data sharing which addresses the above challenges by using a publicly available dashboard with de-identified, aggregated participant data from a large HIV surveillance cohort. Materials and Methods Data in this study originated from the Rakai Community Cohort Study (RCCS), which was integrated into a centralized data mart as part of a larger data management strategy for the Rakai Health Sciences Program in Uganda. These data were used to build a publicly available, protected health information (PHI)-secured visualization dashboard for general research use. Results Using two unique case studies, we demonstrate the capability of the dashboard to generate the following hypotheses: firstly, that HIV prevention strategies ART and circumcision have differing levels of impact depending on the marital status of investigated communities; secondly, that ART is very successful in comparison to circumcision as an interventional strategy in certain communities. Discussion The democratization of large-scale anonymized epidemiological data using public-facing dashboards has multiple benefits, including facilitated exploration of research data and increased reproducibility of research findings. Conclusion By allowing the public to explore data in depth and form new hypotheses, public-facing dashboard platforms have significant potential to generate new relationships and collaborations and further scientific discovery and reproducibility.

Publisher

Oxford University Press (OUP)

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